RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 DEF6Q9H4E7 631 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 PFKFB2O60825 505 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 BPIFA3Q9BQP9 254 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
LMNA-201ENST00000347559 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 LZTFL1Q9NQ48 299 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
LMNA-201ENST00000347559 RHOXF2BP0C7M4 288 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 IQUBQ8NA54 791 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 RHOXF2Q9BQY4 288 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 DLC1Q96QB1 1528 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
LMNA-201ENST00000347559 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 HDXQ7Z353 690 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
LMNA-201ENST00000347559 MAP2K7O14733 419 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 SPTLC2O15270 562 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 BRD3Q15059 726 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 VSTM4Q8IW00 320 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 MYCBPQ99417 103 aaPredicted RBP17.66■□□□□ 0.42
LMNA-201ENST00000347559 LLPHQ9BRT6 129 aaKnown RBP17.66■□□□□ 0.42
LMNA-201ENST00000347559 HSD3B7Q9H2F3 369 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 PXDNLA1KZ92 1463 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
LMNA-201ENST00000347559 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 STOX1Q6ZVD7 989 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 GJB4Q9NTQ9 266 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
LMNA-201ENST00000347559 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
LMNA-201ENST00000347559 MYL5Q02045 173 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 NCAPGQ9BPX3 1015 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 ABCB6Q9NP58 842 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 ATL3Q6DD88 541 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 RAB11FIP4Q86YS3 637 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 PNKPQ96T60 521 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
LMNA-201ENST00000347559 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 KCNQ3O43525 872 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 TFRCP02786 760 aaKnown RBP17.65■□□□□ 0.42
LMNA-201ENST00000347559 PFKFB1P16118 471 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 BEND6Q5SZJ8 279 aaPredicted RBP17.65■□□□□ 0.42
LMNA-201ENST00000347559 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 KIFC2Q96AC6 838 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 COL15A1P39059 1388 aa17.65■□□□□ 0.42
LMNA-201ENST00000347559 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.42
LMNA-201ENST00000347559 A0A1W2PQ27 194 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 A0A1W2PQ64 194 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 A0A1W2PQD8 194 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 SYNE3Q6ZMZ3 975 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 CNNM3Q8NE01 707 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 BRMS1Q9HCU9 246 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 MTF1Q14872 753 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 TMEM139Q8IV31 216 aa17.64■□□□□ 0.41
LMNA-201ENST00000347559 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
LMNA-201ENST00000347559 FAM208AQ9UK61 1670 aaKnown RBP17.63■□□□□ 0.41
LMNA-201ENST00000347559 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 IKBKBO14920 756 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 PNOCQ13519 176 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
LMNA-201ENST00000347559 FCHSD1Q86WN1 690 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 ANKZF1Q9H8Y5 726 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 TMEM131LA2VDJ0 1609 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 NEDD4P46934 1319 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 GOLGA6L9A6NEM1 432 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 ERLIN1O75477 346 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 USPL1Q5W0Q7 1092 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 LRRC31Q6UY01 552 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 KCNG4Q8TDN1 519 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 SRGAP1Q7Z6B7 1085 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 MICALL1Q8N3F8 863 aa17.63■□□□□ 0.41
LMNA-201ENST00000347559 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
LMNA-201ENST00000347559 MRPL44Q9H9J2 332 aaKnown RBP17.62■□□□□ 0.41
LMNA-201ENST00000347559 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
LMNA-201ENST00000347559 CUTAO60888 179 aa17.62■□□□□ 0.41
LMNA-201ENST00000347559 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
LMNA-201ENST00000347559 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
LMNA-201ENST00000347559 METP08581 1390 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 CORO7P57737 925 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 AIMP1Q12904 312 aaKnown RBP17.61■□□□□ 0.41
LMNA-201ENST00000347559 C8orf76Q96K31 380 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 FAM204AQ9H8W3 233 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 CARMIL3Q8ND23 1372 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 A0A0U1RQJ8 604 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 SYKP43405 635 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 ATRIPQ8WXE1 791 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
LMNA-201ENST00000347559 GPHNQ9NQX3 736 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms