RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 GNL3LQ9NVN8 582 aaKnown RBP23.14■■□□□ 1.29
CHMP4A-201ENST00000347519 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
CHMP4A-201ENST00000347519 CCDC88AQ3V6T2 1871 aa23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 SCN9AQ15858 1988 aa23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 PPIP5K2O43314 1243 aa23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 CYP2E1P05181 493 aaPredicted RBP23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 PAG1Q9NWQ8 432 aa23.13■■□□□ 1.29
CHMP4A-201ENST00000347519 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 TAOK3Q9H2K8 898 aa23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 PIH1D3Q9NQM4 214 aaKnown RBP23.12■■□□□ 1.29
CHMP4A-201ENST00000347519 DOCK2Q92608 1830 aa23.11■■□□□ 1.29
CHMP4A-201ENST00000347519 ZBTB22O15209 634 aa23.11■■□□□ 1.29
CHMP4A-201ENST00000347519 CHAF1AQ13111 956 aaPredicted RBP23.11■■□□□ 1.29
CHMP4A-201ENST00000347519 KCNQ5Q9NR82 932 aa23.11■■□□□ 1.29
CHMP4A-201ENST00000347519 DENND2AQ9ULE3 1009 aa23.11■■□□□ 1.29
CHMP4A-201ENST00000347519 SEMA3EO15041 775 aa23.1■■□□□ 1.29
CHMP4A-201ENST00000347519 IARSP41252 1262 aaKnown RBP23.1■■□□□ 1.29
CHMP4A-201ENST00000347519 EVI5LQ96CN4 794 aa23.1■■□□□ 1.29
CHMP4A-201ENST00000347519 LTBP3Q9NS15 1303 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 ECE2O60344 883 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 FRAT2O75474 233 aaPredicted RBP23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 CHGBP05060 677 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 ARHGAP27Q6ZUM4 889 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 CNTROBQ8N137 903 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 MYH7P12883 1935 aa23.09■■□□□ 1.29
CHMP4A-201ENST00000347519 SBF1O95248 1867 aa23.08■■□□□ 1.29
CHMP4A-201ENST00000347519 YDJCA8MPS7 323 aa23.08■■□□□ 1.29
CHMP4A-201ENST00000347519 LARGE2Q8N3Y3 721 aa23.08■■□□□ 1.29
CHMP4A-201ENST00000347519 PDS5AQ29RF7 1337 aaKnown RBP23.07■■□□□ 1.28
CHMP4A-201ENST00000347519 KBTBD3Q8NAB2 608 aa23.07■■□□□ 1.28
CHMP4A-201ENST00000347519 PSME4Q14997 1843 aa23.07■■□□□ 1.28
CHMP4A-201ENST00000347519 FAM205AQ6ZU69 1335 aa23.07■■□□□ 1.28
CHMP4A-201ENST00000347519 G3V3G9 751 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 GTF2IP78347 998 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 GRIK5Q16478 980 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 FSD1Q9BTV5 496 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 VPS33BQ9H267 617 aa23.06■■□□□ 1.28
CHMP4A-201ENST00000347519 C8orf34Q49A92 452 aa23.05■■□□□ 1.28
CHMP4A-201ENST00000347519 PODNQ7Z5L7 613 aa23.05■■□□□ 1.28
CHMP4A-201ENST00000347519 MXD3Q9BW11 206 aa23.05■■□□□ 1.28
CHMP4A-201ENST00000347519 DICER1Q9UPY3 1922 aaKnown RBP23.04■■□□□ 1.28
CHMP4A-201ENST00000347519 CDC45O75419 566 aa23.03■■□□□ 1.28
CHMP4A-201ENST00000347519 CHMLP26374 656 aa23.03■■□□□ 1.28
CHMP4A-201ENST00000347519 FBXW7Q969H0 707 aa23.03■■□□□ 1.28
CHMP4A-201ENST00000347519 ABCF2Q9UG63 623 aa23.03■■□□□ 1.28
CHMP4A-201ENST00000347519 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 GPR162Q16538 588 aa23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 NIM1KQ8IY84 436 aa23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 CERS5Q8N5B7 392 aa23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 WDR66Q8TBY9 1149 aa23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 SALL1Q9NSC2 1324 aa23.02■■□□□ 1.28
CHMP4A-201ENST00000347519 IDH1O75874 414 aaKnown RBP23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 TTLL5Q6EMB2 1281 aa23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 ZNF384Q8TF68 577 aa23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 PRDX5P30044 214 aa23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 IL25Q9H293 177 aa23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
CHMP4A-201ENST00000347519 MAST2Q6P0Q8 1798 aa23■■□□□ 1.27
CHMP4A-201ENST00000347519 NMIQ13287 307 aaPredicted RBP23■■□□□ 1.27
CHMP4A-201ENST00000347519 DACT2Q5SW24 774 aa23■■□□□ 1.27
CHMP4A-201ENST00000347519 FAM227BQ96M60 508 aa23■■□□□ 1.27
CHMP4A-201ENST00000347519 LRP2BPQ9P2M1 347 aa23■■□□□ 1.27
CHMP4A-201ENST00000347519 RFX7Q2KHR2 1363 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 USP17L3A6NCW0 530 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 USP17L4A6NCW7 530 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 RAD17O75943 681 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 ADD2P35612 726 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 MFSD14BQ5SR56 506 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 USP17L1Q7RTZ2 530 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 RAI14Q9P0K7 980 aa22.99■■□□□ 1.27
CHMP4A-201ENST00000347519 A0A0D9SFI3 127 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 TCRBV5S4A2TA0A5A2 114 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 RNF113AO15541 343 aaKnown RBP22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 PDE6AP16499 860 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 LMNB1P20700 586 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 ERICH6Q7L0X2 663 aa22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 SEC62Q99442 399 aaKnown RBP22.98■■□□□ 1.27
CHMP4A-201ENST00000347519 SEC24BO95487 1268 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 CXCL9Q07325 125 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 SLC9C2Q5TAH2 1124 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 CWC27Q6UX04 472 aaKnown RBP22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 MAGEB6Q8N7X4 407 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 TBC1D22AQ8WUA7 517 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 DIAPH3Q9NSV4 1193 aa22.97■■□□□ 1.27
CHMP4A-201ENST00000347519 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 ADAMTSL1Q8N6G6 1762 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 PSMD14O00487 310 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 MECOMQ03112 1051 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 MAP3K12Q12852 859 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 ZMYM1Q5SVZ6 1142 aa22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 NSUN4Q96CB9 384 aaKnown RBP22.96■■□□□ 1.27
CHMP4A-201ENST00000347519 ZNF532Q9HCE3 1301 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms