RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 GMNNO75496 209 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 CCDC172P0C7W6 258 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 TNNI2P48788 182 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
CUL3-202ENST00000344951 IL16Q14005 1332 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 RXRAP19793 462 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 MCM7P33993 719 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 GTPBP4Q9BZE4 634 aaKnown RBP16.99■□□□□ 0.31
CUL3-202ENST00000344951 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
CUL3-202ENST00000344951 KANK3Q6NY19 840 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 PI4KAP2A4QPH2 592 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 PI4KAP1Q8N8J0 262 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 HSPA1LP34931 641 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 Q6ZUG5 572 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 MICALL1Q8N3F8 863 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
CUL3-202ENST00000344951 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
CUL3-202ENST00000344951 CUL4BQ13620 913 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 ZYXQ15942 572 aaKnown RBP16.98■□□□□ 0.31
CUL3-202ENST00000344951 E7EVH7 732 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 ANO3Q9BYT9 981 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 TRIM6Q9C030 488 aaPredicted RBP16.98■□□□□ 0.31
CUL3-202ENST00000344951 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
CUL3-202ENST00000344951 SETDB2Q96T68 719 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
CUL3-202ENST00000344951 IVLP07476 585 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 GSTO1P78417 241 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 UBLCP1Q8WVY7 318 aaPredicted RBP16.97■□□□□ 0.31
CUL3-202ENST00000344951 TRIM7Q9C029 511 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
CUL3-202ENST00000344951 PIK3R4Q99570 1358 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 RLBP1P12271 317 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 NACA2Q9H009 215 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 PPME1Q9Y570 386 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 RHOXF2BP0C7M4 288 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 RHOXF2Q9BQY4 288 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 AFG3L2Q9Y4W6 797 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 DAPK3O43293 454 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 VPS18Q9P253 973 aa16.97■□□□□ 0.31
CUL3-202ENST00000344951 MKRN1Q9UHC7 482 aaKnown RBP16.97■□□□□ 0.31
CUL3-202ENST00000344951 SPDYE3A6NKU9 549 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 SYT10Q6XYQ8 523 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 EHBP1Q8NDI1 1231 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 LRRC43Q8N309 656 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 GUCA1BQ9UMX6 200 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 DDX39AO00148 427 aaKnown RBP16.96■□□□□ 0.31
CUL3-202ENST00000344951 CAPN2P17655 700 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 HS1BP3Q53T59 392 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 RABEP2Q9H5N1 569 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 C6orf50Q9HD87 102 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 SORBS3O60504 671 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
CUL3-202ENST00000344951 RTN1Q16799 776 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 GOLGA1Q92805 767 aa16.96■□□□□ 0.31
CUL3-202ENST00000344951 RTL1A6NKG5 1358 aa16.96■□□□□ 0.3
CUL3-202ENST00000344951 GAS8O95995 478 aa16.96■□□□□ 0.3
CUL3-202ENST00000344951 NSD2O96028 1365 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 HELBQ8NG08 1087 aaPredicted RBP16.95■□□□□ 0.3
CUL3-202ENST00000344951 CCDC77Q9BR77 488 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 RBSNQ9H1K0 784 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
CUL3-202ENST00000344951 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 AK2P54819 239 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 UBXN1Q04323 297 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 ZKSCAN3Q9BRR0 538 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 RMND1Q9NWS8 449 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 CYLC1P35663 651 aaPredicted RBP16.95■□□□□ 0.3
CUL3-202ENST00000344951 BIRC3Q13489 604 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 USP37Q86T82 979 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
CUL3-202ENST00000344951 ZBTB43O43298 467 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 CEP83Q9Y592 693 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
CUL3-202ENST00000344951 NOS1P29475 1434 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 CTAGE9A4FU28 777 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 CTAGE1Q96RT6 745 aa16.94■□□□□ 0.3
CUL3-202ENST00000344951 PDE1CQ14123 709 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 SEPT6Q14141 434 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 VPS52Q8N1B4 723 aa16.93■□□□□ 0.3
CUL3-202ENST00000344951 FEZ2Q9UHY8 353 aaPredicted RBP16.93■□□□□ 0.3
CUL3-202ENST00000344951 KIF5AQ12840 1032 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms