RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 KRT222Q8N1A0 295 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 ENGASEQ8NFI3 743 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
SCARB1-202ENST00000339570 KIAA1468Q9P260 1216 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 RGPD2P0DJD1 1756 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 TAF7LQ5H9L4 462 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 DPF2Q92785 391 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 PPP1R13BQ96KQ4 1090 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 CABP4P57796 275 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
SCARB1-202ENST00000339570 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 ZFP91Q96JP5 570 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-202ENST00000339570 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-202ENST00000339570 PNOCQ13519 176 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-202ENST00000339570 FMR1NBQ8N0W7 255 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-202ENST00000339570 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
SCARB1-202ENST00000339570 SEC31AO94979 1220 aaKnown RBP18.72■□□□□ 0.59
SCARB1-202ENST00000339570 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
SCARB1-202ENST00000339570 TTC39AQ5SRH9 613 aa18.72■□□□□ 0.59
SCARB1-202ENST00000339570 NYAP1Q6ZVC0 841 aa18.72■□□□□ 0.59
SCARB1-202ENST00000339570 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
SCARB1-202ENST00000339570 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
SCARB1-202ENST00000339570 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
SCARB1-202ENST00000339570 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 PFKFB1P16118 471 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 SCARF1Q14162 830 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 ZNF827Q17R98 1081 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 MNS1Q8NEH6 495 aa18.71■□□□□ 0.59
SCARB1-202ENST00000339570 A0A0G2JS52 829 aa18.71■□□□□ 0.58
SCARB1-202ENST00000339570 KIF20AO95235 890 aa18.71■□□□□ 0.58
SCARB1-202ENST00000339570 FANCCQ00597 558 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 SARM1Q6SZW1 724 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
SCARB1-202ENST00000339570 FGAP02671 866 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 HMGB1P09429 215 aaKnown RBP18.7■□□□□ 0.58
SCARB1-202ENST00000339570 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
SCARB1-202ENST00000339570 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 NKX2-3Q8TAU0 364 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 ZNF446Q9NWS9 450 aa18.7■□□□□ 0.58
SCARB1-202ENST00000339570 SLFN14P0C7P3 912 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 UBASH3AP57075 661 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 TPM4P67936 248 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 NFXL1Q6ZNB6 911 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 CCDC34Q96HJ3 373 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 PUS7LQ9H0K6 701 aaKnown RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 FOXN1O15353 648 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 CDC25BP30305 580 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 SENP2Q9HC62 589 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 ZAP70P43403 619 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 ADALQ6DHV7 355 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
SCARB1-202ENST00000339570 CARD6Q9BX69 1037 aa18.69■□□□□ 0.58
SCARB1-202ENST00000339570 NRDCO43847 1150 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 IDH1O75874 414 aaKnown RBP18.68■□□□□ 0.58
SCARB1-202ENST00000339570 PHKG2P15735 406 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 IMMTQ16891 758 aaKnown RBP18.68■□□□□ 0.58
SCARB1-202ENST00000339570 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
SCARB1-202ENST00000339570 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 UTYO14607 1347 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 VGLL3A8MV65 326 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 NEMFO60524 1076 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 ZMYM1Q5SVZ6 1142 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 FAM89AQ96GI7 184 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 MROH7-TTC4A0A0A0MT08 1334 aa18.68■□□□□ 0.58
SCARB1-202ENST00000339570 SYKP43405 635 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 CPLX3Q8WVH0 158 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-202ENST00000339570 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
SCARB1-202ENST00000339570 COBLO75128 1261 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 CAVIN2O95810 425 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 CDK11BP21127 795 aaKnown RBP18.67■□□□□ 0.58
SCARB1-202ENST00000339570 TERF2Q15554 542 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 UBXN4Q92575 508 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 GPTP24298 496 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 CLCN6P51797 869 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 GSDMDP57764 484 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
SCARB1-202ENST00000339570 TEX35Q5T0J7 233 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 DESI2Q9BSY9 194 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 ALG1Q9BT22 464 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
SCARB1-202ENST00000339570 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
SCARB1-202ENST00000339570 ANO1Q5XXA6 986 aa18.66■□□□□ 0.58
SCARB1-202ENST00000339570 CYP27B1O15528 508 aa18.66■□□□□ 0.58
SCARB1-202ENST00000339570 GYS2P54840 703 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms