RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 BIN1O00499 593 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 TSPY4P0CV99 314 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 TSPY10P0CW01 314 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 STX1AQ16623 288 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 FAM228AQ86W67 206 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 CCDC150Q8NCX0 1101 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 ZFYVE16Q7Z3T8 1539 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 CHGAP10645 457 aaKnown RBP11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 PECAM1P16284 738 aaPredicted RBP11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 MFSD4BQ5TF39 518 aa11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 CCDC97Q96F63 343 aaPredicted RBP11.06□□□□□ -0.64
PTCHD4-201ENST00000339488 A0A1B0GVG6 124 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 OPLAHO14841 1288 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 CHMLP26374 656 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 GNGT1P63211 74 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 HSP90AA4PQ58FG1 418 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 WLSQ5T9L3 541 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TCEANC2Q96MN5 208 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 PPP2R2CQ9Y2T4 447 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 MYO1BO43795 1136 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 ZEB2O60315 1214 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 ZMYND10O75800 440 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 ATP1A3P13637 1013 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TACO1Q9BSH4 297 aaKnown RBP11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
PTCHD4-201ENST00000339488 TTC21AQ8NDW8 1320 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 CAPN15O75808 1086 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 KIAA0754O94854 1291 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 CDCA2Q69YH5 1023 aaPredicted RBP11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 HMMRO75330 724 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 ME3Q16798 604 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 ARL10Q8N8L6 244 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 DPF2Q92785 391 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 SAAL1Q96ER3 474 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 SLC40A1Q9NP59 571 aa11.04□□□□□ -0.64
PTCHD4-201ENST00000339488 ERLIN1O75477 346 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 GGCXP38435 758 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 SCNN1BP51168 640 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 HHATQ5VTY9 493 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 TTC14Q96N46 770 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 SLC39A2Q9NP94 309 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 LZTFL1Q9NQ48 299 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 INO80Q9ULG1 1556 aaPredicted RBP11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 NSD3Q9BZ95 1437 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 ATP2C2O75185 946 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 USP5P45974 858 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 SLC5A9Q2M3M2 681 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 DPCR1Q3MIW9 517 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 TLDC1Q6P9B6 456 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 NAT10Q9H0A0 1025 aaKnown RBP11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
PTCHD4-201ENST00000339488 NRDCO43847 1150 aa11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 CUTAO60888 179 aa11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 ABCD1P33897 745 aa11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 CEP85Q6P2H3 762 aa11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 ATP7AQ04656 1500 aa11.02□□□□□ -0.64
PTCHD4-201ENST00000339488 NDUFAB1O14561 156 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 STK3Q13188 491 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 PDCLQ13371 301 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 MTF1Q14872 753 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 SRGAP1Q7Z6B7 1085 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 CCDC13Q8IYE1 715 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 MPHOSPH8Q99549 860 aa11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.65
PTCHD4-201ENST00000339488 RMI1Q9H9A7 625 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms