RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 STARD3NLO95772 234 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
SF1-202ENST00000334944 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 PDCP20941 246 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 ITGA6P23229 1130 aa16.25■□□□□ 0.19
SF1-202ENST00000334944 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
SF1-202ENST00000334944 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
SF1-202ENST00000334944 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
SF1-202ENST00000334944 DENND2AQ9ULE3 1009 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
SF1-202ENST00000334944 PARP4Q9UKK3 1724 aaKnown RBP16.24■□□□□ 0.19
SF1-202ENST00000334944 HNRNPH2P55795 449 aaKnown RBP16.23■□□□□ 0.19
SF1-202ENST00000334944 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
SF1-202ENST00000334944 TJP1Q07157 1748 aa16.23■□□□□ 0.19
SF1-202ENST00000334944 CTDNEP1O95476 244 aa16.23■□□□□ 0.19
SF1-202ENST00000334944 OTUD7BQ6GQQ9 843 aa16.23■□□□□ 0.19
SF1-202ENST00000334944 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
SF1-202ENST00000334944 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
SF1-202ENST00000334944 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 FOXP2O15409 715 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 PCCAP05165 728 aaPredicted RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 TPD52L1Q16890 204 aaPredicted RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 TTLL11Q8NHH1 800 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 ABCC6O95255 1503 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 MAP3K15Q6ZN16 1313 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 CIAO1O76071 339 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
SF1-202ENST00000334944 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 GJB4Q9NTQ9 266 aa16.22■□□□□ 0.19
SF1-202ENST00000334944 ELF2Q15723 593 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 A0A087WWV3 80 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 SMTNL1A8MU46 457 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
SF1-202ENST00000334944 MCAMP43121 646 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 FBXO38Q6PIJ6 1188 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
SF1-202ENST00000334944 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 CALCOCO1Q9P1Z2 691 aa16.21■□□□□ 0.19
SF1-202ENST00000334944 NR1I2O75469 434 aa16.2■□□□□ 0.18
SF1-202ENST00000334944 FGAP02671 866 aa16.2■□□□□ 0.18
SF1-202ENST00000334944 CYP19A1P11511 503 aaPredicted RBP16.2■□□□□ 0.18
SF1-202ENST00000334944 RBM6P78332 1123 aaKnown RBP16.2■□□□□ 0.18
SF1-202ENST00000334944 UBR2Q8IWV8 1755 aa16.2■□□□□ 0.18
SF1-202ENST00000334944 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
SF1-202ENST00000334944 ALDH8A1Q9H2A2 487 aaPredicted RBP16.2■□□□□ 0.18
SF1-202ENST00000334944 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 EXOC5O00471 708 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 APPP05067 770 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
SF1-202ENST00000334944 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
SF1-202ENST00000334944 RESTQ13127 1097 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
SF1-202ENST00000334944 STK11IPQ8N1F8 1099 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 FUCA2Q9BTY2 467 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 FEZ2Q9UHY8 353 aaPredicted RBP16.19■□□□□ 0.18
SF1-202ENST00000334944 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 STRCQ7RTU9 1775 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 USP27XA6NNY8 438 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 TULP2O00295 520 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
SF1-202ENST00000334944 PFKFB2O60825 505 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 CSF1RP07333 972 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 RXRAP19793 462 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
SF1-202ENST00000334944 PHKA1P46020 1223 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 CTSWP56202 376 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 NEK11Q8NG66 645 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 ERCC4Q92889 916 aaPredicted RBP16.18■□□□□ 0.18
SF1-202ENST00000334944 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 TNMDQ9H2S6 317 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 GOLGA6L6A8MZA4 724 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 GPAA1O43292 621 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 UBN2Q6ZU65 1347 aa16.18■□□□□ 0.18
SF1-202ENST00000334944 KCNQ4P56696 695 aa16.17■□□□□ 0.18
SF1-202ENST00000334944 SECISBP2LQ93073 1101 aaKnown RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 TRMT1Q9NXH9 659 aaKnown RBP16.17■□□□□ 0.18
SF1-202ENST00000334944 RFX7Q2KHR2 1363 aa16.17■□□□□ 0.18
SF1-202ENST00000334944 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms