RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
COPB2-201ENST00000333188 DHX32Q7L7V1 743 aaKnown RBP10.64□□□□□ -0.71
COPB2-201ENST00000333188 TTC14Q96N46 770 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 COL15A1P39059 1388 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 TOB2Q14106 344 aaPredicted RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 ZMYM1Q5SVZ6 1142 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 GJD4Q96KN9 370 aaPredicted RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 SPATA32Q96LK8 384 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ZSCAN31Q96LW9 406 aaPredicted RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.71
COPB2-201ENST00000333188 KIF1AQ12756 1690 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 APPBP2Q92624 585 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 AIFM3Q96NN9 605 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 RPS8P62241 208 aaKnown RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 SCRN1Q12765 414 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
COPB2-201ENST00000333188 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
COPB2-201ENST00000333188 ME1P48163 572 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 MRE11P49959 708 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 KLHL40Q2TBA0 621 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 RPGRQ92834 1020 aaKnown RBP10.62□□□□□ -0.71
COPB2-201ENST00000333188 GNL3LQ9NVN8 582 aaKnown RBP10.62□□□□□ -0.71
COPB2-201ENST00000333188 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 CSF1RP07333 972 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 DDIT3P35638 169 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 TRPM3Q9HCF6 1732 aaPredicted RBP10.62□□□□□ -0.71
COPB2-201ENST00000333188 UBE2Q2LH0YL09 131 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 PARP10Q53GL7 1025 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 TMEM67Q5HYA8 995 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 ZNF622Q969S3 477 aaKnown RBP eCLIP10.62□□□□□ -0.712e-8■□□□□ 8.9
COPB2-201ENST00000333188 SENP2Q9HC62 589 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
COPB2-201ENST00000333188 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 CIAO1O76071 339 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 KRT85P78386 507 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
COPB2-201ENST00000333188 CUL4AQ13619 759 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 ORC3Q9UBD5 711 aaPredicted RBP10.61□□□□□ -0.71
COPB2-201ENST00000333188 MTMR6Q9Y217 621 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 APBA3O96018 575 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 TXNRD3Q86VQ6 643 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 DZIP1Q86YF9 867 aaKnown RBP10.61□□□□□ -0.71
COPB2-201ENST00000333188 RBSNQ9H1K0 784 aa10.61□□□□□ -0.71
COPB2-201ENST00000333188 THRAP3Q9Y2W1 955 aaKnown RBP10.61□□□□□ -0.71
COPB2-201ENST00000333188 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
COPB2-201ENST00000333188 MCM5P33992 734 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 ZSCAN25Q6NSZ9 544 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 INTS4Q96HW7 963 aaKnown RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 USP42Q9H9J4 1324 aaKnown RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 ERICH2A1L162 156 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 CCDC69A6NI79 296 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 ST3GAL1Q11201 340 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 NFIXQ14938 502 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 SYAP1Q96A49 352 aaPredicted RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 NACAP1Q9BZK3 213 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 NTSR2O95665 410 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 UQCRFS1P1P0C7P4 283 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 PDCP20941 246 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 MARCKSP29966 332 aaPredicted RBP10.6□□□□□ -0.71
COPB2-201ENST00000333188 PRDX5P30044 214 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 MFSD6Q6ZSS7 791 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 DRC7Q8IY82 874 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 CERKQ8TCT0 537 aa10.6□□□□□ -0.71
COPB2-201ENST00000333188 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
COPB2-201ENST00000333188 EVX2Q03828 476 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 ZRSR1Q15695 479 aaKnown RBP10.59□□□□□ -0.71
COPB2-201ENST00000333188 VPS72Q15906 364 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 MINPP1Q9UNW1 487 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 STRCQ7RTU9 1775 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 ALS2Q96Q42 1657 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 TULP1O00294 542 aaPredicted RBP10.59□□□□□ -0.71
COPB2-201ENST00000333188 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
COPB2-201ENST00000333188 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 C8orf76Q96K31 380 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 MROH5Q6ZUA9 1318 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 ADD2P35612 726 aa10.59□□□□□ -0.71
COPB2-201ENST00000333188 ZNF830Q96NB3 372 aaPredicted RBP10.59□□□□□ -0.71
COPB2-201ENST00000333188 NAP1L5Q96NT1 182 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms