RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 KIAA0825Q8IV33 1275 aa20.24■□□□□ 0.83
C11orf88-201ENST00000332814 TRPM4Q8TD43 1214 aa20.24■□□□□ 0.83
C11orf88-201ENST00000332814 IQSEC3Q9UPP2 1182 aaPredicted RBP20.24■□□□□ 0.83
C11orf88-201ENST00000332814 MMP14P50281 582 aa20.23■□□□□ 0.83
C11orf88-201ENST00000332814 NEUROD6Q96NK8 337 aa20.23■□□□□ 0.83
C11orf88-201ENST00000332814 GMLQ99445 158 aa20.23■□□□□ 0.83
C11orf88-201ENST00000332814 ADAMTSL1Q8N6G6 1762 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 A0A1B0GUL7 405 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
C11orf88-201ENST00000332814 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
C11orf88-201ENST00000332814 HSP90AB4PQ58FF6 505 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 ZC3H15Q8WU90 426 aaKnown RBP20.22■□□□□ 0.83
C11orf88-201ENST00000332814 MYOZ2Q9NPC6 264 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 FAM205AQ6ZU69 1335 aa20.22■□□□□ 0.83
C11orf88-201ENST00000332814 APLP1P51693 650 aa20.21■□□□□ 0.83
C11orf88-201ENST00000332814 ERC1Q8IUD2 1116 aa20.21■□□□□ 0.83
C11orf88-201ENST00000332814 TBC1D22AQ8WUA7 517 aa20.21■□□□□ 0.83
C11orf88-201ENST00000332814 F8W031 263 aaPredicted RBP20.2■□□□□ 0.82
C11orf88-201ENST00000332814 DCPSQ96C86 337 aaKnown RBP20.2■□□□□ 0.82
C11orf88-201ENST00000332814 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
C11orf88-201ENST00000332814 HIRAP54198 1017 aaPredicted RBP20.19■□□□□ 0.82
C11orf88-201ENST00000332814 TIMM10P62072 90 aa20.19■□□□□ 0.82
C11orf88-201ENST00000332814 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
C11orf88-201ENST00000332814 SEMA3EO15041 775 aa20.18■□□□□ 0.82
C11orf88-201ENST00000332814 EGFRP00533 1210 aa20.18■□□□□ 0.82
C11orf88-201ENST00000332814 ADORA1P30542 326 aa20.18■□□□□ 0.82
C11orf88-201ENST00000332814 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
C11orf88-201ENST00000332814 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
C11orf88-201ENST00000332814 ARAP2Q8WZ64 1704 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 PHKA1P46020 1223 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 RBM5P52756 815 aaKnown RBP eCLIP20.17■□□□□ 0.82
C11orf88-201ENST00000332814 SCARF1Q14162 830 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 CCDC102BQ68D86 513 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 WDR66Q8TBY9 1149 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 DENND2AQ9ULE3 1009 aa20.17■□□□□ 0.82
C11orf88-201ENST00000332814 ZNF646O15015 1829 aaPredicted RBP20.16■□□□□ 0.82
C11orf88-201ENST00000332814 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
C11orf88-201ENST00000332814 TNNI3KQ59H18 835 aa20.16■□□□□ 0.82
C11orf88-201ENST00000332814 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
C11orf88-201ENST00000332814 TTF2Q9UNY4 1162 aaKnown RBP20.16■□□□□ 0.82
C11orf88-201ENST00000332814 FPGT-TNNI3KV9GXZ4 949 aa20.16■□□□□ 0.82
C11orf88-201ENST00000332814 MYO1BO43795 1136 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 ITGBL1O95965 494 aaPredicted RBP20.15■□□□□ 0.82
C11orf88-201ENST00000332814 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
C11orf88-201ENST00000332814 MAST3O60307 1309 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 PASKQ96RG2 1323 aa20.15■□□□□ 0.82
C11orf88-201ENST00000332814 APBB1O00213 710 aa20.14■□□□□ 0.81
C11orf88-201ENST00000332814 CCDC158Q5M9N0 1113 aa20.14■□□□□ 0.81
C11orf88-201ENST00000332814 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
C11orf88-201ENST00000332814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.14■□□□□ 0.81
C11orf88-201ENST00000332814 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
C11orf88-201ENST00000332814 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
C11orf88-201ENST00000332814 SIRT2Q8IXJ6 389 aa20.13■□□□□ 0.81
C11orf88-201ENST00000332814 ZGPATQ8N5A5 531 aaKnown RBP20.13■□□□□ 0.81
C11orf88-201ENST00000332814 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
C11orf88-201ENST00000332814 SUGT1Q9Y2Z0 365 aa20.13■□□□□ 0.81
C11orf88-201ENST00000332814 PITPNM2Q9BZ72 1349 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 WNT10BO00744 389 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 ZNF408Q9H9D4 720 aa20.12■□□□□ 0.81
C11orf88-201ENST00000332814 TMEM88BA6NKF7 163 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 TRAF5O00463 557 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 RASGRF1Q13972 1273 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 AACSQ86V21 672 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 CLASRPQ8N2M8 674 aaKnown RBP20.11■□□□□ 0.81
C11orf88-201ENST00000332814 DBNDD2Q9BQY9 259 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 CREBZFQ9NS37 354 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 SERPINA10Q9UK55 444 aa20.11■□□□□ 0.81
C11orf88-201ENST00000332814 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
C11orf88-201ENST00000332814 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
C11orf88-201ENST00000332814 MYH13Q9UKX3 1938 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 ASTN2O75129 1339 aaPredicted RBP20.1■□□□□ 0.81
C11orf88-201ENST00000332814 PDS5AQ29RF7 1337 aaKnown RBP20.1■□□□□ 0.81
C11orf88-201ENST00000332814 ADM5C9JUS6 153 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 LDHBP07195 334 aaKnown RBP20.1■□□□□ 0.81
C11orf88-201ENST00000332814 CRKP46108 304 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 MTMR14Q8NCE2 650 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 CCDC8Q9H0W5 538 aaPredicted RBP20.1■□□□□ 0.81
C11orf88-201ENST00000332814 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
C11orf88-201ENST00000332814 SALL1Q9NSC2 1324 aa20.09■□□□□ 0.81
C11orf88-201ENST00000332814 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
C11orf88-201ENST00000332814 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
C11orf88-201ENST00000332814 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
C11orf88-201ENST00000332814 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
C11orf88-201ENST00000332814 APOBEC3FQ8IUX4 373 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms