RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 KRT83P78385 493 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 TMTC4Q5T4D3 741 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 ATP5DP30049 168 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 SPECC1L-ADORA2AF8WAN1 911 aa18.44■□□□□ 0.54
PTCH1-201ENST00000331920 RILPQ96NA2 401 aa18.43■□□□□ 0.54
PTCH1-201ENST00000331920 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
PTCH1-201ENST00000331920 ZBTB3Q9H5J0 574 aa18.43■□□□□ 0.54
PTCH1-201ENST00000331920 IQSEC3Q9UPP2 1182 aaPredicted RBP18.43■□□□□ 0.54
PTCH1-201ENST00000331920 BACH1O14867 736 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 RFC4P35249 363 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 UTP11Q9Y3A2 253 aaKnown RBP18.42■□□□□ 0.54
PTCH1-201ENST00000331920 ST5P78524 1137 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 STK38LQ9Y2H1 464 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 SPDYE16A6NNV3 312 aaPredicted RBP18.42■□□□□ 0.54
PTCH1-201ENST00000331920 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 KSR1Q8IVT5 923 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 RPAP2Q8IXW5 612 aaPredicted RBP18.42■□□□□ 0.54
PTCH1-201ENST00000331920 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 SCAPERQ9BY12 1400 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
PTCH1-201ENST00000331920 IL1RL1Q01638 556 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 GINS2Q9Y248 185 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 SPOPO43791 374 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 ATICP31939 592 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 C4orf50Q6ZRC1 276 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 CEP128Q6ZU80 1094 aa18.42■□□□□ 0.54
PTCH1-201ENST00000331920 STX10O60499 249 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 BIRC3Q13489 604 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 SLC8A3P57103 927 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 PRIMPOLQ96LW4 560 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 STK10O94804 968 aaKnown RBP18.41■□□□□ 0.54
PTCH1-201ENST00000331920 COG7P83436 770 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 RTN1Q16799 776 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 HVCN1Q96D96 273 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 A0A1B0GUA9 196 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
PTCH1-201ENST00000331920 TRIM68Q6AZZ1 485 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 KLF18A0A0U1RQI7 1052 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 CDR2Q01850 454 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 RPS6KA2Q15349 733 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 TSGA10Q9BZW7 698 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 TRIM31Q9BZY9 425 aa18.41■□□□□ 0.54
PTCH1-201ENST00000331920 MCM5P33992 734 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 NXNQ6DKJ4 435 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 MGARPQ8TDB4 240 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
PTCH1-201ENST00000331920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTCH1-201ENST00000331920 PDZD8Q8NEN9 1154 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 CHMP6Q96FZ7 201 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 OPHN1O60890 802 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
PTCH1-201ENST00000331920 UTP14CQ5TAP6 766 aaKnown RBP18.4■□□□□ 0.54
PTCH1-201ENST00000331920 CCDC26Q8TAB7 109 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
PTCH1-201ENST00000331920 TSNAXIP1Q2TAA8 658 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.54
PTCH1-201ENST00000331920 NOC2LQ9Y3T9 749 aaKnown RBP18.39■□□□□ 0.54
PTCH1-201ENST00000331920 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 ZBTB43O43298 467 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 WDR44Q5JSH3 913 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 FNBP1Q96RU3 617 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 NOD1Q9Y239 953 aa18.39■□□□□ 0.54
PTCH1-201ENST00000331920 DNAJC25Q9H1X3 360 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 RBBP5Q15291 538 aaKnown RBP18.39■□□□□ 0.53
PTCH1-201ENST00000331920 DDX21Q9NR30 783 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTCH1-201ENST00000331920 NOLC1Q14978 699 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTCH1-201ENST00000331920 BSPRYQ5W0U4 402 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 TNNC1P63316 161 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 PHLDB2Q86SQ0 1253 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 I3L4J1 428 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 LDHCP07864 332 aa18.39■□□□□ 0.53
PTCH1-201ENST00000331920 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 GSTO1P78417 241 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 HS2ST1Q7LGA3 356 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 USTQ9Y2C2 406 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
PTCH1-201ENST00000331920 MIER3Q7Z3K6 550 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 ZNF710Q8N1W2 664 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 SFMBT1Q9UHJ3 866 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 USH1CQ9Y6N9 552 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTCH1-201ENST00000331920 SRGAP1Q7Z6B7 1085 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 TACO1Q9BSH4 297 aaKnown RBP18.38■□□□□ 0.53
PTCH1-201ENST00000331920 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
PTCH1-201ENST00000331920 BZW2Q9Y6E2 419 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms