RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ADORA1P30542 326 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
C11orf54-201ENST00000331239 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 FRAT2O75474 233 aaPredicted RBP11.48□□□□□ -0.57
C11orf54-201ENST00000331239 SPATA5Q8NB90 893 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 SYT17Q9BSW7 474 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
C11orf54-201ENST00000331239 MYH7P12883 1935 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 CERS3Q8IU89 383 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.47□□□□□ -0.57
C11orf54-201ENST00000331239 PAG1Q9NWQ8 432 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 C21orf2O43822 256 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 CDC45O75419 566 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 PHKA1P46020 1223 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 RUFY2Q8WXA3 655 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 RAD50Q92878 1312 aa11.47□□□□□ -0.57
C11orf54-201ENST00000331239 DICER1Q9UPY3 1922 aaKnown RBP11.46□□□□□ -0.57
C11orf54-201ENST00000331239 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
C11orf54-201ENST00000331239 SDSP20132 328 aa11.46□□□□□ -0.57
C11orf54-201ENST00000331239 BCAMP50895 628 aa11.46□□□□□ -0.57
C11orf54-201ENST00000331239 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
C11orf54-201ENST00000331239 CHD4Q14839 1912 aa11.46□□□□□ -0.57
C11orf54-201ENST00000331239 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
C11orf54-201ENST00000331239 MCAMP43121 646 aa11.46□□□□□ -0.58
C11orf54-201ENST00000331239 IL27Q8NEV9 243 aa11.46□□□□□ -0.58
C11orf54-201ENST00000331239 SNRKQ9NRH2 765 aa11.46□□□□□ -0.58
C11orf54-201ENST00000331239 HMG20BQ9P0W2 317 aa11.46□□□□□ -0.58
C11orf54-201ENST00000331239 MAST2Q6P0Q8 1798 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 MAP4K4O95819 1239 aaPredicted RBP11.45□□□□□ -0.58
C11orf54-201ENST00000331239 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 GRIN3BO60391 1043 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 GYG1P46976 350 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
C11orf54-201ENST00000331239 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 UBE3CQ15386 1083 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
C11orf54-201ENST00000331239 SLKQ9H2G2 1235 aaPredicted RBP11.45□□□□□ -0.58
C11orf54-201ENST00000331239 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
C11orf54-201ENST00000331239 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 C22orf23Q9BZE7 217 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 MAST3O60307 1309 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 G3V3G9 751 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
C11orf54-201ENST00000331239 GSTO1P78417 241 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 HDLBPQ00341 1268 aaKnown RBP11.44□□□□□ -0.58
C11orf54-201ENST00000331239 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
C11orf54-201ENST00000331239 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
C11orf54-201ENST00000331239 RPAP1Q9BWH6 1393 aaPredicted RBP11.43□□□□□ -0.58
C11orf54-201ENST00000331239 RNF113AO15541 343 aaKnown RBP11.43□□□□□ -0.58
C11orf54-201ENST00000331239 CYP2E1P05181 493 aaPredicted RBP11.43□□□□□ -0.58
C11orf54-201ENST00000331239 LDHCP07864 332 aa11.43□□□□□ -0.58
C11orf54-201ENST00000331239 ZAP70P43403 619 aa11.43□□□□□ -0.58
C11orf54-201ENST00000331239 TXNRD3Q86VQ6 643 aa11.43□□□□□ -0.58
C11orf54-201ENST00000331239 ZNRF3Q9ULT6 936 aa11.43□□□□□ -0.58
C11orf54-201ENST00000331239 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 CHMLP26374 656 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
C11orf54-201ENST00000331239 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 ZNF646O15015 1829 aaPredicted RBP11.42□□□□□ -0.58
C11orf54-201ENST00000331239 GOLIM4O00461 696 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 RILPL2Q969X0 211 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 DNAJC2Q99543 621 aaKnown RBP11.42□□□□□ -0.58
C11orf54-201ENST00000331239 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
C11orf54-201ENST00000331239 SBF1O95248 1867 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 SNAP23O00161 211 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 NFKBIEO00221 500 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 ECE2O60344 883 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 REC8O95072 547 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 LMNB1P20700 586 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 KLRK1P26718 216 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 TNIP1Q15025 636 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 UTRNP46939 3433 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 RPS12P25398 132 aaKnown RBP11.41□□□□□ -0.58
C11orf54-201ENST00000331239 SCARF1Q14162 830 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
C11orf54-201ENST00000331239 GOLGB1Q14789 3259 aaKnown RBP11.4□□□□□ -0.58
C11orf54-201ENST00000331239 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
C11orf54-201ENST00000331239 ADD2P35612 726 aa11.4□□□□□ -0.58
C11orf54-201ENST00000331239 TBC1D9Q6ZT07 1266 aa11.4□□□□□ -0.58
C11orf54-201ENST00000331239 AGBL3Q8NEM8 1001 aa11.4□□□□□ -0.58
C11orf54-201ENST00000331239 APPBP2Q92624 585 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms