RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF771Q7L3S4 317 aaPredicted RBP14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 PHKBQ93100 1093 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 RCOR1Q9UKL0 485 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 DPCR1Q3MIW9 517 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 TMX1Q9H3N1 280 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 CARMIL3Q8ND23 1372 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 GPAA1O43292 621 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 SFPQP23246 707 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 ADD1P35611 737 aaKnown RBP14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 FOXO4P98177 505 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 SCARF1Q14162 830 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 RABL6Q3YEC7 729 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 LRRC8AQ8IWT6 810 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 PDILTQ8N807 584 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 LTN1O94822 1766 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 PLA2G4DQ86XP0 818 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 CREBRFQ8IUR6 639 aa14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 KDM6AO15550 1401 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-201ENST00000325110 SMTNL1A8MU46 457 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 CFAP100Q494V2 611 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 ALG1Q9BT22 464 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 PUS7LQ9H0K6 701 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 SPECC1Q5M775 1068 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 AKAP2Q9Y2D5 859 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 SH3TC1Q8TE82 1336 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 METAP2P50579 478 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGCS1-201ENST00000325110 B4E1Z4 1266 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 CAVIN2O95810 425 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 DENND2AQ9ULE3 1009 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 H7C1W4 665 aa14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 XPO4Q9C0E2 1151 aaKnown RBP14.96□□□□□ -0.01
HMGCS1-201ENST00000325110 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 IQCB1Q15051 598 aa14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 CCDC191Q8NCU4 936 aa14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 NUP133Q8WUM0 1156 aa14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 AIDAQ96BJ3 306 aa14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 HEG1Q9ULI3 1381 aa14.96□□□□□ -0.02
HMGCS1-201ENST00000325110 NFAT5O94916 1531 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 KIF18AQ8NI77 898 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 KCNG4Q8TDN1 519 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 TBC1D2BQ9UPU7 963 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 ZNF202O95125 648 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 CCAR2Q8N163 923 aaKnown RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 ZNF215Q9UL58 517 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 MEGF6O75095 1541 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 SYKP43405 635 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 ZNF274Q96GC6 653 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 ZKSCAN3Q9BRR0 538 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 IQSEC3Q9UPP2 1182 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-201ENST00000325110 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 SNW1Q13573 536 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 SLC26A6Q9BXS9 759 aa14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 PAXBP1Q9Y5B6 917 aa14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 EXOSC10Q01780 885 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 KIAA1468Q9P260 1216 aa14.94□□□□□ -0.02
HMGCS1-201ENST00000325110 GOLGA8AA7E2F4 631 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 SNAP23O00161 211 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 FDPSP14324 419 aaKnown RBP14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 GOLGA8FQ08AF8 430 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 GOLGA8DPQ0D2H9 430 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 SYT10Q6XYQ8 523 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 APPBP2Q92624 585 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 ZBTB9Q96C00 473 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 ADALQ6DHV7 355 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 OLFM4Q6UX06 510 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 LINC00301Q8NCQ3 95 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 CLIC6Q96NY7 704 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 IFIT3O14879 490 aaKnown RBP14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 ELF2Q15723 593 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 TMEM67Q5HYA8 995 aa14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 SMAP1Q8IYB5 467 aaPredicted RBP14.93□□□□□ -0.02
HMGCS1-201ENST00000325110 PFKFB1P16118 471 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 HSPA2P54652 639 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 CMTR1Q8N1G2 835 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 MRFAP1L1Q96HT8 127 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 NAPBQ9H115 298 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 ITGA6P23229 1130 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 NEMFO60524 1076 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 ZFYP08048 801 aaPredicted RBP14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.026e-42■■■■□ 22.6
HMGCS1-201ENST00000325110 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
HMGCS1-201ENST00000325110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.025e-16■□□□□ 10.9
HMGCS1-201ENST00000325110 KIF28PB7ZC32 967 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms