RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 DENND2AQ9ULE3 1009 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
DDX39A-202ENST00000324340 UFL1O94874 794 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 KCNA3P22001 575 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 TGFB2P61812 414 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 VPS37DQ86XT2 251 aa15.35■□□□□ 0.05
DDX39A-202ENST00000324340 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
DDX39A-202ENST00000324340 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
DDX39A-202ENST00000324340 MYO5AQ9Y4I1 1855 aaKnown RBP15.34■□□□□ 0.05
DDX39A-202ENST00000324340 CLCN1P35523 988 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 PTGER2P43116 358 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 ZMYM1Q5SVZ6 1142 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 MPNDQ8N594 471 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 TDRD7Q8NHU6 1098 aaKnown RBP15.34■□□□□ 0.05
DDX39A-202ENST00000324340 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.056e-8■■■□□ 16.2
DDX39A-202ENST00000324340 TMX4Q9H1E5 349 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-202ENST00000324340 HELLSQ9NRZ9 838 aa15.34■□□□□ 0.05
DDX39A-202ENST00000324340 BRCA1P38398 1863 aaKnown RBP15.33■□□□□ 0.05
DDX39A-202ENST00000324340 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
DDX39A-202ENST00000324340 IGSF3O75054 1194 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 MCMDC2Q4G0Z9 681 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 ZNF804AQ7Z570 1209 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 LSG1Q9H089 658 aaKnown RBP15.33■□□□□ 0.04
DDX39A-202ENST00000324340 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
DDX39A-202ENST00000324340 IL1R1P14778 569 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 DPEP1P16444 411 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 ADD2P35612 726 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 UBE3CQ15386 1083 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-202ENST00000324340 TTLL6Q8N841 843 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 IL17RAQ96F46 866 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 RTFDC1Q9BY42 306 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-202ENST00000324340 CD2APQ9Y5K6 639 aa15.32■□□□□ 0.04
DDX39A-202ENST00000324340 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 CHGBP05060 677 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 BECN1Q14457 450 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 APPBP2Q92624 585 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 CD209Q9NNX6 404 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-202ENST00000324340 MAST2Q6P0Q8 1798 aa15.31■□□□□ 0.04
DDX39A-202ENST00000324340 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 TCRBV5S4A2TA0A5A2 114 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 C6orf229H3BNL8 230 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-202ENST00000324340 MAP3K12Q12852 859 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-202ENST00000324340 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-202ENST00000324340 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-202ENST00000324340 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
DDX39A-202ENST00000324340 KIF2CQ99661 725 aa15.3■□□□□ 0.04
DDX39A-202ENST00000324340 MAST3O60307 1309 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 IDH1O75874 414 aaKnown RBP15.29■□□□□ 0.04
DDX39A-202ENST00000324340 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
DDX39A-202ENST00000324340 PDE6AP16499 860 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 HSPA4P34932 840 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 SLFNL1Q499Z3 407 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 OSBP2Q969R2 916 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 EYA3Q99504 573 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 COA1Q9GZY4 146 aa15.29■□□□□ 0.04
DDX39A-202ENST00000324340 PTH1RQ03431 593 aa15.28■□□□□ 0.04
DDX39A-202ENST00000324340 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
DDX39A-202ENST00000324340 PIM2Q9P1W9 311 aa15.28■□□□□ 0.04
DDX39A-202ENST00000324340 WWC3Q9ULE0 1092 aa15.28■□□□□ 0.04
DDX39A-202ENST00000324340 ZNF532Q9HCE3 1301 aa15.28■□□□□ 0.04
DDX39A-202ENST00000324340 M0R2C6 588 aa15.27■□□□□ 0.04
DDX39A-202ENST00000324340 MCCP23508 829 aa15.27■□□□□ 0.04
DDX39A-202ENST00000324340 ANAPC15P60006 121 aa15.27■□□□□ 0.04
DDX39A-202ENST00000324340 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-202ENST00000324340 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.04
DDX39A-202ENST00000324340 KCNB2Q92953 911 aa15.27■□□□□ 0.04
DDX39A-202ENST00000324340 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.04
DDX39A-202ENST00000324340 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
DDX39A-202ENST00000324340 FAM205AQ6ZU69 1335 aa15.27■□□□□ 0.03
DDX39A-202ENST00000324340 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.03
DDX39A-202ENST00000324340 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 CCDC93Q567U6 631 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 CCDC129Q6ZRS4 1044 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 SUPT20HQ8NEM7 779 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 PSMD1Q99460 953 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 DSCC1Q9BVC3 393 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 PUS7LQ9H0K6 701 aaKnown RBP15.26■□□□□ 0.03
DDX39A-202ENST00000324340 SPON1Q9HCB6 807 aa15.26■□□□□ 0.03
DDX39A-202ENST00000324340 C21orf2O43822 256 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms