RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 TDRD7Q8NHU6 1098 aaKnown RBP23.12■■□□□ 1.29
CIRBP-201ENST00000320936 SASH1O94885 1247 aa23.11■■□□□ 1.29
CIRBP-201ENST00000320936 HSPA6P17066 643 aa23.11■■□□□ 1.29
CIRBP-201ENST00000320936 GMLQ99445 158 aa23.11■■□□□ 1.29
CIRBP-201ENST00000320936 A0A1B0GUL7 405 aa23.1■■□□□ 1.29
CIRBP-201ENST00000320936 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-201ENST00000320936 NEUROD6Q96NK8 337 aa23.1■■□□□ 1.29
CIRBP-201ENST00000320936 GNL3LQ9NVN8 582 aaKnown RBP23.1■■□□□ 1.29
CIRBP-201ENST00000320936 HDAC9Q9UKV0 1011 aa23.1■■□□□ 1.29
CIRBP-201ENST00000320936 EGFRP00533 1210 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 ADORA1P30542 326 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 ZNF280AP59817 542 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-201ENST00000320936 TIMM10P62072 90 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 MFSD14BQ5SR56 506 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 RPAP2Q8IXW5 612 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-201ENST00000320936 CNTROBQ8N137 903 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 MYOZ2Q9NPC6 264 aa23.09■■□□□ 1.29
CIRBP-201ENST00000320936 HIRAP54198 1017 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-201ENST00000320936 CERS5Q8N5B7 392 aa23.08■■□□□ 1.29
CIRBP-201ENST00000320936 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.29
CIRBP-201ENST00000320936 FAM205AQ6ZU69 1335 aa23.08■■□□□ 1.29
CIRBP-201ENST00000320936 PHKA1P46020 1223 aa23.07■■□□□ 1.28
CIRBP-201ENST00000320936 ZC3H15Q8WU90 426 aaKnown RBP23.07■■□□□ 1.28
CIRBP-201ENST00000320936 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
CIRBP-201ENST00000320936 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
CIRBP-201ENST00000320936 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-201ENST00000320936 APBB1O00213 710 aa23.06■■□□□ 1.28
CIRBP-201ENST00000320936 APLP1P51693 650 aa23.06■■□□□ 1.28
CIRBP-201ENST00000320936 FKBP1AP62942 108 aaKnown RBP23.06■■□□□ 1.28
CIRBP-201ENST00000320936 ERC1Q8IUD2 1116 aa23.06■■□□□ 1.28
CIRBP-201ENST00000320936 TBC1D22AQ8WUA7 517 aa23.06■■□□□ 1.28
CIRBP-201ENST00000320936 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
CIRBP-201ENST00000320936 POLR2AP24928 1970 aaKnown RBP23.05■■□□□ 1.28
CIRBP-201ENST00000320936 HSP90AB4PQ58FF6 505 aa23.05■■□□□ 1.28
CIRBP-201ENST00000320936 CCDC102BQ68D86 513 aa23.05■■□□□ 1.28
CIRBP-201ENST00000320936 DCPSQ96C86 337 aaKnown RBP23.05■■□□□ 1.28
CIRBP-201ENST00000320936 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
CIRBP-201ENST00000320936 GGA3Q9NZ52 723 aa23.05■■□□□ 1.28
CIRBP-201ENST00000320936 MMP14P50281 582 aa23.04■■□□□ 1.28
CIRBP-201ENST00000320936 RBM5P52756 815 aaKnown RBP eCLIP23.04■■□□□ 1.282e-12■□□□□ 8.3
CIRBP-201ENST00000320936 SCARF1Q14162 830 aa23.04■■□□□ 1.28
CIRBP-201ENST00000320936 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
CIRBP-201ENST00000320936 SIRT2Q8IXJ6 389 aa23.04■■□□□ 1.28
CIRBP-201ENST00000320936 GLIS2Q9BZE0 524 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-201ENST00000320936 TTF2Q9UNY4 1162 aaKnown RBP23.04■■□□□ 1.28
CIRBP-201ENST00000320936 FPGT-TNNI3KV9GXZ4 949 aa23.04■■□□□ 1.28
CIRBP-201ENST00000320936 TRPM7Q96QT4 1865 aa23.03■■□□□ 1.28
CIRBP-201ENST00000320936 COL1A1P02452 1464 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-201ENST00000320936 ASTN2O75129 1339 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-201ENST00000320936 ITGBL1O95965 494 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-201ENST00000320936 ECM29Q5VYK3 1845 aa23.03■■□□□ 1.28
CIRBP-201ENST00000320936 TRAF5O00463 557 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 DLGAP5Q15398 846 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 ANGEL2Q5VTE6 544 aaKnown RBP23.02■■□□□ 1.28
CIRBP-201ENST00000320936 KRT26Q7Z3Y9 468 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 WDR66Q8TBY9 1149 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 GPR108Q9NPR9 543 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 DENND2AQ9ULE3 1009 aa23.02■■□□□ 1.28
CIRBP-201ENST00000320936 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
CIRBP-201ENST00000320936 PASKQ96RG2 1323 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 SEMA3EO15041 775 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 NBPF9Q3BBW0 867 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 USP48Q86UV5 1035 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 SULF1Q8IWU6 871 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 PGAP2Q9UHJ9 254 aa23.01■■□□□ 1.27
CIRBP-201ENST00000320936 CEP350Q5VT06 3117 aa23■■□□□ 1.27
CIRBP-201ENST00000320936 HTRA3P83110 453 aa23■■□□□ 1.27
CIRBP-201ENST00000320936 CFAP100Q494V2 611 aa23■■□□□ 1.27
CIRBP-201ENST00000320936 CDC37L1Q7L3B6 337 aa23■■□□□ 1.27
CIRBP-201ENST00000320936 WNT10BO00744 389 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 RASGRF1Q13972 1273 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 TTC39AQ5SRH9 613 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 DBNDD2Q9BQY9 259 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 ZNF408Q9H9D4 720 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 IL1RAPL2Q9NP60 686 aa22.99■■□□□ 1.27
CIRBP-201ENST00000320936 ADM5C9JUS6 153 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 FMR1Q06787 632 aaKnown RBP eCLIP22.98■■□□□ 1.27
CIRBP-201ENST00000320936 GRIK5Q16478 980 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 CCDC158Q5M9N0 1113 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 AACSQ86V21 672 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 RHPN1Q8TCX5 695 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
CIRBP-201ENST00000320936 CCDC8Q9H0W5 538 aaPredicted RBP22.98■■□□□ 1.27
CIRBP-201ENST00000320936 MAST3O60307 1309 aa22.97■■□□□ 1.27
CIRBP-201ENST00000320936 MYO1BO43795 1136 aa22.97■■□□□ 1.27
CIRBP-201ENST00000320936 UQCRFS1P1P0C7P4 283 aa22.97■■□□□ 1.27
CIRBP-201ENST00000320936 PCDHAC2Q9Y5I4 1007 aa22.97■■□□□ 1.27
CIRBP-201ENST00000320936 TMEM88BA6NKF7 163 aa22.96■■□□□ 1.27
CIRBP-201ENST00000320936 RAB11FIP3O75154 756 aa22.96■■□□□ 1.27
CIRBP-201ENST00000320936 ZGPATQ8N5A5 531 aaKnown RBP22.96■■□□□ 1.27
CIRBP-201ENST00000320936 TLR7Q9NYK1 1049 aaKnown RBP22.96■■□□□ 1.27
CIRBP-201ENST00000320936 SERPINA10Q9UK55 444 aa22.96■■□□□ 1.27
CIRBP-201ENST00000320936 SCAF8Q9UPN6 1271 aaKnown RBP22.96■■□□□ 1.27
CIRBP-201ENST00000320936 SUGT1Q9Y2Z0 365 aa22.96■■□□□ 1.27
CIRBP-201ENST00000320936 PITPNM2Q9BZ72 1349 aa22.95■■□□□ 1.27
CIRBP-201ENST00000320936 SPDYE2BA6NHP3 402 aa22.95■■□□□ 1.26
CIRBP-201ENST00000320936 LDHBP07195 334 aaKnown RBP22.95■■□□□ 1.26
CIRBP-201ENST00000320936 SPDYE6P0CI01 402 aa22.95■■□□□ 1.26
CIRBP-201ENST00000320936 CRKP46108 304 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms