RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF589Q86UQ0 364 aaPredicted RBP18.91■□□□□ 0.62
CLIP4-201ENST00000320081 MMRN2Q9H8L6 949 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 NR1I2O75469 434 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
CLIP4-201ENST00000320081 UTP14AQ9BVJ6 771 aaKnown RBP18.91■□□□□ 0.62
CLIP4-201ENST00000320081 UQCRFS1P1P0C7P4 283 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 GSDMDP57764 484 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 TRPM2O94759 1503 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 ADD1P35611 737 aaKnown RBP18.9■□□□□ 0.62
CLIP4-201ENST00000320081 ZNF174Q15697 407 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 TAX1BP1Q86VP1 789 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 EEF2KMTQ96G04 330 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 CCDC66A2RUB6 948 aa18.9■□□□□ 0.62
CLIP4-201ENST00000320081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLIP4-201ENST00000320081 ARID5AQ03989 594 aa18.89■□□□□ 0.62
CLIP4-201ENST00000320081 ERLIN1O75477 346 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 RFC4P35249 363 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 PHACTR2O75167 634 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 JAKMIP3Q5VZ66 844 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 MTMR6Q9Y217 621 aa18.89■□□□□ 0.61
CLIP4-201ENST00000320081 VWA3AA6NCI4 1184 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 PDE4BQ07343 736 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 SYCP1Q15431 976 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
CLIP4-201ENST00000320081 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 EIF6P56537 245 aaKnown RBP18.88■□□□□ 0.61
CLIP4-201ENST00000320081 CCT6AP40227 531 aaKnown RBP18.88■□□□□ 0.61
CLIP4-201ENST00000320081 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 SPA17Q15506 151 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 FKBP15Q5T1M5 1219 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 USP28Q96RU2 1077 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 TRIM75PA6NK02 468 aa18.88■□□□□ 0.61
CLIP4-201ENST00000320081 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
CLIP4-201ENST00000320081 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
CLIP4-201ENST00000320081 TSPY3P0CV98 308 aa18.87■□□□□ 0.61
CLIP4-201ENST00000320081 TSPY8P0CW00 308 aa18.87■□□□□ 0.61
CLIP4-201ENST00000320081 TRIM21P19474 475 aaKnown RBP18.87■□□□□ 0.61
CLIP4-201ENST00000320081 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
CLIP4-201ENST00000320081 PUF60Q9UHX1 559 aaKnown RBP18.87■□□□□ 0.61
CLIP4-201ENST00000320081 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
CLIP4-201ENST00000320081 U2AF2P26368 475 aaKnown RBP eCLIP18.87■□□□□ 0.612e-8■■■■■ 36.5
CLIP4-201ENST00000320081 JADE2Q9NQC1 790 aa18.87■□□□□ 0.61
CLIP4-201ENST00000320081 MAGEB6P1A0A0J9YX57 407 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 RIOK3O14730 519 aaKnown RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 RIMBP2O15034 1052 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 KDM5DQ9BY66 1539 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 E7EWF7 191 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 SNAP23O00161 211 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 CRACR2AQ9BSW2 395 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 SSR1P43307 286 aaKnown RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 LONRF3Q496Y0 759 aa18.86■□□□□ 0.61
CLIP4-201ENST00000320081 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
CLIP4-201ENST00000320081 ADORA1P30542 326 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 ZNF827Q17R98 1081 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 KRT23Q9C075 422 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
CLIP4-201ENST00000320081 ABCA8O94911 1581 aa18.85■□□□□ 0.61
CLIP4-201ENST00000320081 POLR2DO15514 142 aaKnown RBP18.85■□□□□ 0.61
CLIP4-201ENST00000320081 DIS3L2Q8IYB7 885 aaKnown RBP18.85■□□□□ 0.61
CLIP4-201ENST00000320081 KIF2AO00139 706 aaPredicted RBP18.84■□□□□ 0.61
CLIP4-201ENST00000320081 USP8P40818 1118 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 STAT6P42226 847 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 MACROD2A1Z1Q3 448 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 YEATS4O95619 227 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 GJB4Q9NTQ9 266 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 ZNF532Q9HCE3 1301 aa18.84■□□□□ 0.61
CLIP4-201ENST00000320081 SETQ01105 290 aaPredicted RBP18.83■□□□□ 0.61
CLIP4-201ENST00000320081 CCDC40Q4G0X9 1142 aa18.83■□□□□ 0.61
CLIP4-201ENST00000320081 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.61
CLIP4-201ENST00000320081 KDM5AP29375 1690 aaKnown RBP18.83■□□□□ 0.61
CLIP4-201ENST00000320081 AKR1B10O60218 316 aa18.83■□□□□ 0.61
CLIP4-201ENST00000320081 NEMFO60524 1076 aa18.83■□□□□ 0.61
CLIP4-201ENST00000320081 KIF5BP33176 963 aa18.83■□□□□ 0.61
CLIP4-201ENST00000320081 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.61
CLIP4-201ENST00000320081 APPBP2Q92624 585 aa18.83■□□□□ 0.61
CLIP4-201ENST00000320081 CAPZA3Q96KX2 299 aa18.83■□□□□ 0.6
CLIP4-201ENST00000320081 ANGEL1Q9UNK9 670 aaKnown RBP18.83■□□□□ 0.6
CLIP4-201ENST00000320081 ASIC1P78348 528 aa18.83■□□□□ 0.6
CLIP4-201ENST00000320081 ANO1Q5XXA6 986 aa18.83■□□□□ 0.6
CLIP4-201ENST00000320081 ZNF397Q8NF99 534 aaPredicted RBP18.83■□□□□ 0.6
CLIP4-201ENST00000320081 GTF3C6Q969F1 213 aa18.83■□□□□ 0.6
CLIP4-201ENST00000320081 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
CLIP4-201ENST00000320081 LMAN1P49257 510 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 FAM107BQ9H098 131 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 CYP21A2P08686 494 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC148Q8NFR7 591 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 VPS16Q9H269 839 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms