RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 MTMR6Q9Y217 621 aa18.88■□□□□ 0.61
SHISA2-201ENST00000319420 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 ISY1Q9ULR0 285 aaKnown RBP18.87■□□□□ 0.61
SHISA2-201ENST00000319420 MROH5Q6ZUA9 1318 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 DHX32Q7L7V1 743 aaKnown RBP18.87■□□□□ 0.61
SHISA2-201ENST00000319420 SEPT12Q8IYM1 358 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 ZNF445P59923 1031 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 GUCY1B3Q02153 619 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
SHISA2-201ENST00000319420 BCL2L12Q9HB09 334 aa18.87■□□□□ 0.61
SHISA2-201ENST00000319420 RTCBQ9Y3I0 505 aaKnown RBP18.87■□□□□ 0.61
SHISA2-201ENST00000319420 PDE6AP16499 860 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 IMMTQ16891 758 aaKnown RBP18.86■□□□□ 0.61
SHISA2-201ENST00000319420 AIDAQ96BJ3 306 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 TFIP11Q9UBB9 837 aaKnown RBP18.86■□□□□ 0.61
SHISA2-201ENST00000319420 SCRN1Q12765 414 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 VPS37DQ86XT2 251 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 ANKRD18AQ8IVF6 992 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 ARHGEF1Q92888 912 aaKnown RBP18.86■□□□□ 0.61
SHISA2-201ENST00000319420 LRP2BPQ9P2M1 347 aa18.86■□□□□ 0.61
SHISA2-201ENST00000319420 ADD2P35612 726 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 CEBPZQ03701 1054 aaKnown RBP18.85■□□□□ 0.61
SHISA2-201ENST00000319420 TSGA10IPQ3SY00 556 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
SHISA2-201ENST00000319420 RBSNQ9H1K0 784 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 ARMT1Q9H993 441 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 ZNF213O14771 459 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
SHISA2-201ENST00000319420 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHISA2-201ENST00000319420 TOMM22Q9NS69 142 aa18.85■□□□□ 0.61
SHISA2-201ENST00000319420 RXRAP19793 462 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 FGFR2P21802 821 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 KLRK1P26718 216 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 CDC5LQ99459 802 aaKnown RBP18.84■□□□□ 0.61
SHISA2-201ENST00000319420 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
SHISA2-201ENST00000319420 PRKAB2O43741 272 aa18.83■□□□□ 0.61
SHISA2-201ENST00000319420 RFC4P35249 363 aa18.83■□□□□ 0.61
SHISA2-201ENST00000319420 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.61
SHISA2-201ENST00000319420 GTF3C6Q969F1 213 aa18.83■□□□□ 0.61
SHISA2-201ENST00000319420 TFCP2L1Q9NZI6 479 aa18.83■□□□□ 0.61
SHISA2-201ENST00000319420 MBD4O95243 580 aa18.83■□□□□ 0.6
SHISA2-201ENST00000319420 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.6
SHISA2-201ENST00000319420 CERKQ8TCT0 537 aa18.83■□□□□ 0.6
SHISA2-201ENST00000319420 H3BQV1 296 aa18.83■□□□□ 0.6
SHISA2-201ENST00000319420 IFFO2Q5TF58 517 aa18.83■□□□□ 0.6
SHISA2-201ENST00000319420 WNK3Q9BYP7 1800 aa18.82■□□□□ 0.6
SHISA2-201ENST00000319420 UQCRFS1P1P0C7P4 283 aa18.82■□□□□ 0.6
SHISA2-201ENST00000319420 RRP12Q5JTH9 1297 aaKnown RBP18.82■□□□□ 0.6
SHISA2-201ENST00000319420 CCDC144CPQ8IYA2 1237 aa18.82■□□□□ 0.6
SHISA2-201ENST00000319420 TTF1Q15361 905 aaPredicted RBP18.82■□□□□ 0.6
SHISA2-201ENST00000319420 AK7Q96M32 723 aa18.82■□□□□ 0.6
SHISA2-201ENST00000319420 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
SHISA2-201ENST00000319420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.81■□□□□ 0.6
SHISA2-201ENST00000319420 PRC1O43663 620 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 CLEC4GQ6UXB4 293 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 ARID4AP29374 1257 aaPredicted RBP18.81■□□□□ 0.6
SHISA2-201ENST00000319420 MAP3K12Q12852 859 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 NLRP3Q96P20 1036 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 CTNNA3Q9UI47 895 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 COL4A1P02462 1669 aa18.81■□□□□ 0.6
SHISA2-201ENST00000319420 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 CHAF1AQ13111 956 aaPredicted RBP18.8■□□□□ 0.6
SHISA2-201ENST00000319420 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 TAF1P21675 1872 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 TRIM37O94972 964 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 SLC4A8Q2Y0W8 1093 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
SHISA2-201ENST00000319420 B4E1Z4 1266 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
SHISA2-201ENST00000319420 OTUD7BQ6GQQ9 843 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 MBD3O95983 291 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 EXOSC10Q01780 885 aaKnown RBP18.79■□□□□ 0.6
SHISA2-201ENST00000319420 KLF18A0A0U1RQI7 1052 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 TRAPPC3LQ5T215 181 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 ATP6V1DQ9Y5K8 247 aa18.79■□□□□ 0.6
SHISA2-201ENST00000319420 SMIM22K7EJ46 135 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 TRDNQ13061 729 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
SHISA2-201ENST00000319420 NAPBQ9H115 298 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 MYH3P11055 1940 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 GOLGA8BA8MQT2 603 aa18.78■□□□□ 0.6
SHISA2-201ENST00000319420 PDIA3P30101 505 aaKnown RBP18.78■□□□□ 0.6
SHISA2-201ENST00000319420 LRSAM1Q6UWE0 723 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms