RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 ATP2B4P23634 1241 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 AK9Q5TCS8 1911 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 ARID4AP29374 1257 aaPredicted RBP12.17□□□□□ -0.46
GINS3-201ENST00000318129 TGFB2P61812 414 aa12.17□□□□□ -0.46
GINS3-201ENST00000318129 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 KLHL40Q2TBA0 621 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 CLEC17AQ6ZS10 378 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 ZBTB22O15209 634 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 ZNF445P59923 1031 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 PAG1Q9NWQ8 432 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
GINS3-201ENST00000318129 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
GINS3-201ENST00000318129 SNAP23O00161 211 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 KIF20AO95235 890 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 CHMLP26374 656 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 CHRNA5P30532 468 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 MCM5P33992 734 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 PHKA1P46020 1223 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 GPSM2P81274 684 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 VPS37DQ86XT2 251 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
GINS3-201ENST00000318129 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
GINS3-201ENST00000318129 LRRC37AA6NMS7 1700 aa12.15□□□□□ -0.47
GINS3-201ENST00000318129 SEMA3EO15041 775 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
GINS3-201ENST00000318129 FAM84BQ96KN1 310 aaPredicted RBP12.14□□□□□ -0.47
GINS3-201ENST00000318129 FSD1Q9BTV5 496 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
GINS3-201ENST00000318129 BCAMP50895 628 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 FKBP4Q02790 459 aaKnown RBP eCLIP12.14□□□□□ -0.47
GINS3-201ENST00000318129 MPNDQ8N594 471 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
GINS3-201ENST00000318129 GOLIM4O00461 696 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 UFL1O94874 794 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 MCAMP43121 646 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
GINS3-201ENST00000318129 DENND2AQ9ULE3 1009 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 DPEP1P16444 411 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 GYG1P46976 350 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 ZNF804AQ7Z570 1209 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 SPATA5Q8NB90 893 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
GINS3-201ENST00000318129 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
GINS3-201ENST00000318129 IRS2Q9Y4H2 1338 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 REC8O95072 547 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 PTGER2P43116 358 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 ZAP70P43403 619 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
GINS3-201ENST00000318129 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 HMG20BQ9P0W2 317 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
GINS3-201ENST00000318129 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 SCARF1Q14162 830 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 EYA3Q99504 573 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 SNRKQ9NRH2 765 aa12.12□□□□□ -0.47
GINS3-201ENST00000318129 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 WTIPA6NIX2 430 aaPredicted RBP12.11□□□□□ -0.47
GINS3-201ENST00000318129 ZFYP08048 801 aaPredicted RBP12.11□□□□□ -0.47
GINS3-201ENST00000318129 RASGRF1Q13972 1273 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
GINS3-201ENST00000318129 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.11□□□□□ -0.47
GINS3-201ENST00000318129 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
GINS3-201ENST00000318129 KCNA3P22001 575 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
GINS3-201ENST00000318129 RAD50Q92878 1312 aa12.1□□□□□ -0.47
GINS3-201ENST00000318129 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms