RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ZNF446Q9NWS9 450 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 C5P01031 1676 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 NF2P35240 595 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 SF3B2Q13435 895 aaKnown RBP13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
LDLRAD3-201ENST00000315571 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 NUP62CLQ9H1M0 184 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 BTAF1O14981 1849 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 F6X3S4 739 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 ZBTB1Q9Y2K1 713 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 UBE2HP62256 183 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
LDLRAD3-201ENST00000315571 LIG3P49916 1009 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 CEP120Q8N960 986 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 ZSWIM4Q9H7M6 989 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 DNAI1Q9UI46 699 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 SMC3Q9UQE7 1217 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
LDLRAD3-201ENST00000315571 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 JPH2Q9BR39 696 aaPredicted RBP13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 ADAM21Q9UKJ8 722 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 TTC19Q6DKK2 380 aaPredicted RBP13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 ZNF165P49910 485 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 ABCC4O15439 1325 aa13.53□□□□□ -0.24
LDLRAD3-201ENST00000315571 ERLIN2O94905 339 aa13.52□□□□□ -0.24
LDLRAD3-201ENST00000315571 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.24
LDLRAD3-201ENST00000315571 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.24
LDLRAD3-201ENST00000315571 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.24
LDLRAD3-201ENST00000315571 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 IL6STP40189 918 aaPredicted RBP13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 TXNRD1Q16881 649 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 MCM2P49736 904 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 RILPL2Q969X0 211 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
LDLRAD3-201ENST00000315571 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 PLSCR1O15162 318 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 DTNBO60941 627 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 CYP2E1P05181 493 aaPredicted RBP13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 SGSM3Q96HU1 749 aa13.51□□□□□ -0.25
LDLRAD3-201ENST00000315571 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 GNPATO15228 680 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 BRD1O95696 1058 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 LIG1P18858 919 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 LRP10Q7Z4F1 713 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 MED4Q9NPJ6 270 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 SCP2P22307 547 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 PDE6BP35913 854 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 FHOD1Q9Y613 1164 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 EVCP57679 992 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 TYRO3Q06418 890 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 CEP57Q86XR8 500 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 CARD6Q9BX69 1037 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 USP26Q9BXU7 913 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
LDLRAD3-201ENST00000315571 BAG6P46379 1132 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 TJP1Q07157 1748 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms