RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PDE6AP16499 860 aa21.79■■□□□ 1.08
CCDC43-201ENST00000315286 NCLP19338 710 aaKnown RBP21.79■■□□□ 1.08
CCDC43-201ENST00000315286 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
CCDC43-201ENST00000315286 GPT2Q8TD30 523 aa21.79■■□□□ 1.08
CCDC43-201ENST00000315286 BRF1Q92994 677 aa21.79■■□□□ 1.08
CCDC43-201ENST00000315286 TCRBV5S4A2TA0A5A2 114 aa21.78■■□□□ 1.08
CCDC43-201ENST00000315286 NBPF5PQ86XG9 351 aaPredicted RBP21.78■■□□□ 1.08
CCDC43-201ENST00000315286 QTRT2Q9H974 415 aaKnown RBP21.78■■□□□ 1.08
CCDC43-201ENST00000315286 MTMR6Q9Y217 621 aa21.78■■□□□ 1.08
CCDC43-201ENST00000315286 F13A1P00488 732 aa21.78■■□□□ 1.08
CCDC43-201ENST00000315286 HAND2P61296 217 aa21.78■■□□□ 1.08
CCDC43-201ENST00000315286 FGD1P98174 961 aa21.78■■□□□ 1.08
CCDC43-201ENST00000315286 IMMTQ16891 758 aaKnown RBP21.78■■□□□ 1.08
CCDC43-201ENST00000315286 BSDC1Q9NW68 430 aaPredicted RBP21.78■■□□□ 1.08
CCDC43-201ENST00000315286 COL24A1Q17RW2 1714 aa21.77■■□□□ 1.08
CCDC43-201ENST00000315286 CELF1Q92879 486 aaKnown RBP21.77■■□□□ 1.08
CCDC43-201ENST00000315286 GTF3C6Q969F1 213 aa21.77■■□□□ 1.08
CCDC43-201ENST00000315286 BCL11BQ9C0K0 894 aaPredicted RBP21.77■■□□□ 1.08
CCDC43-201ENST00000315286 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
CCDC43-201ENST00000315286 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
CCDC43-201ENST00000315286 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 EP400Q96L91 3159 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 WTIPA6NIX2 430 aaPredicted RBP21.76■■□□□ 1.07
CCDC43-201ENST00000315286 PHF14O94880 888 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 LARP1BQ659C4 914 aaKnown RBP21.76■■□□□ 1.07
CCDC43-201ENST00000315286 CAVIN1Q6NZI2 390 aaKnown RBP21.76■■□□□ 1.07
CCDC43-201ENST00000315286 TPTE2Q6XPS3 522 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 NLRP3Q96P20 1036 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 AGXT2Q9BYV1 514 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 GDPD2Q9HCC8 539 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 MINPP1Q9UNW1 487 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 DOCK2Q92608 1830 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 A0A1B0GUL6 1792 aa21.76■■□□□ 1.07
CCDC43-201ENST00000315286 RFC4P35249 363 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 TRAPPC3LQ5T215 181 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 CHST3Q7LGC8 479 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 GAS2L3Q86XJ1 694 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 NSFL1CQ9UNZ2 370 aaKnown RBP21.75■■□□□ 1.07
CCDC43-201ENST00000315286 MAP3K12Q12852 859 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 MAGEB6Q8N7X4 407 aa21.75■■□□□ 1.07
CCDC43-201ENST00000315286 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
CCDC43-201ENST00000315286 APOBRQ0VD83 1088 aa21.74■■□□□ 1.07
CCDC43-201ENST00000315286 VPS37CA5D8V6 355 aaPredicted RBP21.73■■□□□ 1.07
CCDC43-201ENST00000315286 ZNF213O14771 459 aa21.73■■□□□ 1.07
CCDC43-201ENST00000315286 XRCC6P12956 609 aaKnown RBP eCLIP21.73■■□□□ 1.07
CCDC43-201ENST00000315286 SCRN1Q12765 414 aa21.73■■□□□ 1.07
CCDC43-201ENST00000315286 UBE4AQ14139 1066 aa21.73■■□□□ 1.07
CCDC43-201ENST00000315286 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
CCDC43-201ENST00000315286 STRBPQ96SI9 672 aaKnown RBP21.73■■□□□ 1.07
CCDC43-201ENST00000315286 JAK2O60674 1132 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 PFKFB2O60825 505 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 PDCP20941 246 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 GYG1P46976 350 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 RPS8P62241 208 aaKnown RBP21.72■■□□□ 1.07
CCDC43-201ENST00000315286 AIDAQ96BJ3 306 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
CCDC43-201ENST00000315286 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 ATP6V1DQ9Y5K8 247 aa21.72■■□□□ 1.07
CCDC43-201ENST00000315286 APPP05067 770 aa21.71■■□□□ 1.07
CCDC43-201ENST00000315286 RBM27Q9P2N5 1060 aaKnown RBP21.71■■□□□ 1.07
CCDC43-201ENST00000315286 BRPF3Q9ULD4 1205 aa21.71■■□□□ 1.07
CCDC43-201ENST00000315286 ISY1Q9ULR0 285 aaKnown RBP21.71■■□□□ 1.07
CCDC43-201ENST00000315286 ZNF804BA4D1E1 1349 aa21.71■■□□□ 1.07
CCDC43-201ENST00000315286 PDIA4P13667 645 aaKnown RBP21.71■■□□□ 1.07
CCDC43-201ENST00000315286 GADD45BO75293 160 aaPredicted RBP21.7■■□□□ 1.06
CCDC43-201ENST00000315286 MBD3O95983 291 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 ZSCAN23Q3MJ62 389 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 CDC37L1Q7L3B6 337 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 NBPF3Q9H094 633 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 MRE11P49959 708 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
CCDC43-201ENST00000315286 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 TMEM87AQ8NBN3 555 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 GRPEL1Q9HAV7 217 aa21.7■■□□□ 1.06
CCDC43-201ENST00000315286 GPHNQ9NQX3 736 aaPredicted RBP21.7■■□□□ 1.06
CCDC43-201ENST00000315286 TM4SF1P30408 202 aa21.69■■□□□ 1.06
CCDC43-201ENST00000315286 NFIXQ14938 502 aa21.69■■□□□ 1.06
CCDC43-201ENST00000315286 NCOA7Q8NI08 942 aa21.69■■□□□ 1.06
CCDC43-201ENST00000315286 MBD4O95243 580 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 MCM5P33992 734 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 GNL3LQ9NVN8 582 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 TMEM63CQ9P1W3 806 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 LRP2BPQ9P2M1 347 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 BRWD3Q6RI45 1802 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 PRC1O43663 620 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 PDIA3P30101 505 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 ZNF445P59923 1031 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 CCT2P78371 535 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 DNM1Q05193 864 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 ZNF274Q96GC6 653 aaPredicted RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 FAM84BQ96KN1 310 aaPredicted RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 LLPHQ9BRT6 129 aaKnown RBP21.68■■□□□ 1.06
CCDC43-201ENST00000315286 ARMT1Q9H993 441 aa21.68■■□□□ 1.06
CCDC43-201ENST00000315286 PATL2C9JE40 543 aaKnown RBP21.67■■□□□ 1.06
CCDC43-201ENST00000315286 NPHP1O15259 732 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 CAVIN4Q5BKX8 364 aa21.67■■□□□ 1.06
CCDC43-201ENST00000315286 SMARCC2Q8TAQ2 1214 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms