RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 COPRSQ9NQ92 184 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 IGKV5-2P06315 115 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 TATP17735 454 aaPredicted RBP22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 CEBPZQ03701 1054 aaKnown RBP22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 FBXW7Q969H0 707 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 TAF6LQ9Y6J9 622 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 NEXNQ0ZGT2 675 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 NEK11Q8NG66 645 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 MRFAP1L1Q96HT8 127 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 BOLA2Q9H3K6 86 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 PLEKHG2Q9H7P9 1386 aa22.01■■□□□ 1.11
HERPUD2-201ENST00000311350 RREB1Q92766 1687 aa22■■□□□ 1.11
HERPUD2-201ENST00000311350 R3HDM1Q15032 1099 aaKnown RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 ERCC4Q92889 916 aaPredicted RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 TLR7Q9NYK1 1049 aaKnown RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
HERPUD2-201ENST00000311350 POLR3GO15318 223 aaPredicted RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 PNMA6AP0CW24 399 aaPredicted RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 SARM1Q6SZW1 724 aa22■■□□□ 1.11
HERPUD2-201ENST00000311350 FEZ2Q9UHY8 353 aaPredicted RBP22■■□□□ 1.11
HERPUD2-201ENST00000311350 SYT10Q6XYQ8 523 aa21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 CERS3Q8IU89 383 aa21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 ZSCAN16Q9H4T2 348 aaPredicted RBP21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 NHSQ6T4R5 1651 aa21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 RIC3Q7Z5B4 369 aa21.99■■□□□ 1.11
HERPUD2-201ENST00000311350 NEMFO60524 1076 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 RAD51AP2Q09MP3 1159 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 GCKRQ14397 625 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 METTL22Q9BUU2 404 aaPredicted RBP21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 RESTQ13127 1097 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 GORABQ5T7V8 394 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 NBPF14Q5TI25 921 aa21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 ZNF589Q86UQ0 364 aaPredicted RBP21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 LLPHQ9BRT6 129 aaKnown RBP21.98■■□□□ 1.11
HERPUD2-201ENST00000311350 JAK2O60674 1132 aa21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 SNW1Q13573 536 aaKnown RBP21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 ARHGAP29Q52LW3 1261 aa21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 E4F1Q66K89 784 aaPredicted RBP21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 DHX40Q8IX18 779 aaKnown RBP21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 NFATC2IPQ8NCF5 419 aa21.97■■□□□ 1.11
HERPUD2-201ENST00000311350 NEK1Q96PY6 1258 aa21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 FTOQ9C0B1 505 aaKnown RBP eCLIP21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 BECN2A8MW95 431 aa21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 RABL6Q3YEC7 729 aaPredicted RBP21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 PROM2Q8N271 834 aa21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 L2HGDHQ9H9P8 463 aa21.96■■□□□ 1.11
HERPUD2-201ENST00000311350 RFX5P48382 616 aaPredicted RBP21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 ST5P78524 1137 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 ZCCHC17Q9NP64 241 aaKnown RBP21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 ZNF790Q6PG37 636 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 NBPF11Q86T75 865 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 PPP1R13BQ96KQ4 1090 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 CFAP45Q9UL16 551 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 PCDH11XQ9BZA7 1347 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 PCDH11YQ9BZA8 1340 aa21.95■■□□□ 1.1
HERPUD2-201ENST00000311350 SEC31AO94979 1220 aaKnown RBP21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 TXNRD1Q16881 649 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 SMARCC2Q8TAQ2 1214 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 GOLPH3LQ9H4A5 285 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 HMGB1P09429 215 aaKnown RBP21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 ATL3Q6DD88 541 aa21.94■■□□□ 1.1
HERPUD2-201ENST00000311350 C5P01031 1676 aa21.93■■□□□ 1.1
HERPUD2-201ENST00000311350 CTAGE5O15320 804 aa21.93■■□□□ 1.1
HERPUD2-201ENST00000311350 FOSBP53539 338 aa21.93■■□□□ 1.1
HERPUD2-201ENST00000311350 ZBTB9Q96C00 473 aa21.93■■□□□ 1.1
HERPUD2-201ENST00000311350 SIL1Q9H173 461 aa21.93■■□□□ 1.1
HERPUD2-201ENST00000311350 FAM193AP78312 1265 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 STX1AQ16623 288 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 NAA16Q6N069 864 aaPredicted RBP21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 AOPEPQ8N6M6 819 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 HAUS7Q99871 368 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 EPC1Q9H2F5 836 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 SH3TC1Q8TE82 1336 aa21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 DBNLQ9UJU6 430 aaKnown RBP21.92■■□□□ 1.1
HERPUD2-201ENST00000311350 ZRANB2O95218 330 aaKnown RBP eCLIP21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 PTPN12Q05209 780 aaKnown RBP21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 MCMDC2Q4G0Z9 681 aa21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 EPHA10Q5JZY3 1008 aa21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 XAGE3Q8WTP9 111 aa21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 ZFP91Q96JP5 570 aaPredicted RBP21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.91■■□□□ 1.18e-8■■■■■ 30.2
HERPUD2-201ENST00000311350 PFKFB2O60825 505 aa21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 CCAR1Q8IX12 1150 aaKnown RBP21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 BRF1Q92994 677 aa21.91■■□□□ 1.1
HERPUD2-201ENST00000311350 SMARCE1Q969G3 411 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms