RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 ADAT2Q7Z6V5 191 aaKnown RBP14.28□□□□□ -0.12
USP38-201ENST00000307017 CARD6Q9BX69 1037 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 PFDN4Q9NQP4 134 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 FRMD4BQ9Y2L6 1034 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
USP38-201ENST00000307017 CSPG5O95196 566 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 PDE4BQ07343 736 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 ARHGEF2Q92974 986 aaKnown RBP14.28□□□□□ -0.12
USP38-201ENST00000307017 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 TTLL3Q9Y4R7 772 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 CMTR1Q8N1G2 835 aaKnown RBP14.28□□□□□ -0.12
USP38-201ENST00000307017 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
USP38-201ENST00000307017 DDX17Q92841 729 aaKnown RBP14.27□□□□□ -0.12
USP38-201ENST00000307017 RASAL2Q9UJF2 1139 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 PLEKHH1Q9ULM0 1364 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 SMC6Q96SB8 1091 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 ZKSCAN5Q9Y2L8 839 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 TACC1O75410 805 aa14.27□□□□□ -0.12
USP38-201ENST00000307017 GPCPD1Q9NPB8 672 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 RLBP1P12271 317 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 FAM76AQ8TAV0 307 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 EBAG9O00559 213 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 NEMFO60524 1076 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 KIF5AQ12840 1032 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 TSPYL6Q8N831 410 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.13
USP38-201ENST00000307017 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
USP38-201ENST00000307017 AGTPBP1Q9UPW5 1226 aa14.27□□□□□ -0.13
USP38-201ENST00000307017 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 PCK1P35558 622 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 TFCP2Q12800 502 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 NEK11Q8NG66 645 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 CLCN1P35523 988 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 IGF1RP08069 1367 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 PDE6BP35913 854 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 CLNS1AP54105 237 aaKnown RBP14.26□□□□□ -0.13
USP38-201ENST00000307017 GKAP1Q5VSY0 366 aaPredicted RBP14.26□□□□□ -0.13
USP38-201ENST00000307017 XAGE3Q8WTP9 111 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 RNF41Q9H4P4 317 aaPredicted RBP14.26□□□□□ -0.13
USP38-201ENST00000307017 OPA1O60313 960 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 SESN3P58005 492 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 SPTLC2O15270 562 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 KIF5BP33176 963 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 TRMT44Q8IYL2 757 aaKnown RBP14.26□□□□□ -0.13
USP38-201ENST00000307017 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
USP38-201ENST00000307017 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
USP38-201ENST00000307017 ATP6V0A2Q9Y487 856 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 GUCY2FP51841 1108 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 GOLGA8FQ08AF8 430 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 GOLGA8DPQ0D2H9 430 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 FAM200AQ8TCP9 573 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 GINS2Q9Y248 185 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 PDE1AP54750 535 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 IVLP07476 585 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 LRMPQ12912 555 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 RAB3GAP1Q15042 981 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
USP38-201ENST00000307017 PTPDC1A2A3K4 754 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 KRT2P35908 639 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 COPS6Q7L5N1 327 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
USP38-201ENST00000307017 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
USP38-201ENST00000307017 CCNT1O60563 726 aaKnown RBP14.24□□□□□ -0.13
USP38-201ENST00000307017 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 BAG1Q99933 345 aaPredicted RBP14.24□□□□□ -0.13
USP38-201ENST00000307017 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 CRCPO75575 148 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 PRKG1Q13976 671 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP38-201ENST00000307017 MYO1AQ9UBC5 1043 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
USP38-201ENST00000307017 BSPRYQ5W0U4 402 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 INTS8Q75QN2 995 aaKnown RBP14.23□□□□□ -0.13
USP38-201ENST00000307017 MIPOL1Q8TD10 442 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 ANAPC4Q9UJX5 808 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 MAGED2Q9UNF1 606 aaPredicted RBP14.23□□□□□ -0.13
USP38-201ENST00000307017 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 RFX1P22670 979 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 CREB3L3Q68CJ9 461 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 ANKRD42Q8N9B4 389 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 TRIM7Q9C029 511 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 RFC4P35249 363 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 MCMDC2Q4G0Z9 681 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 DYMQ7RTS9 669 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 UVSSAQ2YD98 709 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 USH1CQ9Y6N9 552 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms