RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 ZNF396Q96N95 335 aaPredicted RBP17.69■□□□□ 0.42
CSDC2-201ENST00000306149 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 NUP188Q5SRE5 1749 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 GOLGA6L19H0YKK7 550 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
CSDC2-201ENST00000306149 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
CSDC2-201ENST00000306149 CACTINQ8WUQ7 758 aaKnown RBP17.69■□□□□ 0.42
CSDC2-201ENST00000306149 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 PARP4Q9UKK3 1724 aaKnown RBP17.69■□□□□ 0.42
CSDC2-201ENST00000306149 RIOK3O14730 519 aaKnown RBP17.68■□□□□ 0.42
CSDC2-201ENST00000306149 EVA1CP58658 441 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 NKX2-3Q8TAU0 364 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
CSDC2-201ENST00000306149 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
CSDC2-201ENST00000306149 SMAP1Q8IYB5 467 aaPredicted RBP17.68■□□□□ 0.42
CSDC2-201ENST00000306149 C16orf45Q96MC5 204 aaPredicted RBP17.68■□□□□ 0.42
CSDC2-201ENST00000306149 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 HLFQ16534 295 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 BCL2L12Q9HB09 334 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 AKAP2Q9Y2D5 859 aa17.68■□□□□ 0.42
CSDC2-201ENST00000306149 ANTXR2P58335 489 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 FAM160A1Q05DH4 1040 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 GPAA1O43292 621 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 STX1AQ16623 288 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 METTL24Q5JXM2 366 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 C8orf76Q96K31 380 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
CSDC2-201ENST00000306149 DCCP43146 1447 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 BECN2A8MW95 431 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 RXRAP19793 462 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 CDC25BP30305 580 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
CSDC2-201ENST00000306149 GREM2Q9H772 168 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
CSDC2-201ENST00000306149 MCAMP43121 646 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 KIF6Q6ZMV9 814 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 MB21D2Q8IYB1 491 aaPredicted RBP17.66■□□□□ 0.42
CSDC2-201ENST00000306149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
CSDC2-201ENST00000306149 PIGBQ92521 554 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 APPBP2Q92624 585 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
CSDC2-201ENST00000306149 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
CSDC2-201ENST00000306149 ZNF213O14771 459 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 CTIFO43310 598 aaKnown RBP17.65■□□□□ 0.42
CSDC2-201ENST00000306149 NDUFA8P51970 172 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 SF3A1Q15459 793 aaKnown RBP17.65■□□□□ 0.42
CSDC2-201ENST00000306149 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 CPLX1O14810 134 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
CSDC2-201ENST00000306149 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
CSDC2-201ENST00000306149 TICAM2Q86XR7 235 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 AIFM3Q96NN9 605 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
CSDC2-201ENST00000306149 CTAGE5O15320 804 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 ITGA6P23229 1130 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 STK38Q15208 465 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 FILIP1Q7Z7B0 1213 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 DHX40Q8IX18 779 aaKnown RBP17.64■□□□□ 0.41
CSDC2-201ENST00000306149 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
CSDC2-201ENST00000306149 UBR2Q8IWV8 1755 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 APPP05067 770 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 CSF1RP07333 972 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 SLC9C2Q5TAH2 1124 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 FMR1NBQ8N0W7 255 aaPredicted RBP17.64■□□□□ 0.41
CSDC2-201ENST00000306149 AOPEPQ8N6M6 819 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 NCOA7Q8NI08 942 aa17.64■□□□□ 0.41
CSDC2-201ENST00000306149 MRPS27Q92552 414 aaKnown RBP17.64■□□□□ 0.41
CSDC2-201ENST00000306149 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
CSDC2-201ENST00000306149 IDH1O75874 414 aaKnown RBP17.63■□□□□ 0.41
CSDC2-201ENST00000306149 ZFYP08048 801 aaPredicted RBP17.63■□□□□ 0.41
CSDC2-201ENST00000306149 EVCP57679 992 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 LRRFIP1Q32MZ4 808 aaKnown RBP17.63■□□□□ 0.41
CSDC2-201ENST00000306149 LINC00301Q8NCQ3 95 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 SARM1Q6SZW1 724 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 FBXO18Q8NFZ0 1043 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
CSDC2-201ENST00000306149 ANKRD7Q92527 254 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 NBPF3Q9H094 633 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 INCENPQ9NQS7 918 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
CSDC2-201ENST00000306149 BIN1O00499 593 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 ATL3Q6DD88 541 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 ANO10Q9NW15 660 aa17.62■□□□□ 0.41
CSDC2-201ENST00000306149 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
CSDC2-201ENST00000306149 PIH1D3Q9NQM4 214 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms