RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZNF827Q17R98 1081 aa26.56■■□□□ 1.84
SMAD1-201ENST00000302085 FAM84BQ96KN1 310 aaPredicted RBP26.56■■□□□ 1.84
SMAD1-201ENST00000302085 ANKRD2Q9GZV1 360 aa26.56■■□□□ 1.84
SMAD1-201ENST00000302085 TPCN1Q9ULQ1 816 aa26.56■■□□□ 1.84
SMAD1-201ENST00000302085 EP400Q96L91 3159 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 TOB2Q14106 344 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-201ENST00000302085 RGS17Q9UGC6 210 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-201ENST00000302085 IQSEC3Q9UPP2 1182 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-201ENST00000302085 MAP3K12Q12852 859 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 ME3Q16798 604 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 AKT1S1Q96B36 256 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 GBP4Q96PP9 640 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 SH2B1Q9NRF2 756 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-201ENST00000302085 CTNNA3Q9UI47 895 aa26.55■■□□□ 1.84
SMAD1-201ENST00000302085 FGAP02671 866 aa26.54■■□□□ 1.84
SMAD1-201ENST00000302085 DDR1Q08345 913 aa26.54■■□□□ 1.84
SMAD1-201ENST00000302085 ANKRD1Q15327 319 aa26.54■■□□□ 1.84
SMAD1-201ENST00000302085 GNL3LQ9NVN8 582 aaKnown RBP26.54■■□□□ 1.84
SMAD1-201ENST00000302085 TFCP2L1Q9NZI6 479 aa26.54■■□□□ 1.84
SMAD1-201ENST00000302085 GRAPQ13588 217 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 CAVIN4Q5BKX8 364 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 FBXO33Q7Z6M2 555 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 GRAPLQ8TC17 118 aaPredicted RBP26.53■■□□□ 1.84
SMAD1-201ENST00000302085 DOCK2Q92608 1830 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 E7EWF7 191 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 KLRK1P26718 216 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 MAGEB6Q8N7X4 407 aa26.53■■□□□ 1.84
SMAD1-201ENST00000302085 ST3GAL1Q11201 340 aa26.52■■□□□ 1.84
SMAD1-201ENST00000302085 POLRMTO00411 1230 aaKnown RBP26.51■■□□□ 1.83
SMAD1-201ENST00000302085 CCDC83Q8IWF9 413 aa26.51■■□□□ 1.83
SMAD1-201ENST00000302085 ST5P78524 1137 aa26.51■■□□□ 1.83
SMAD1-201ENST00000302085 CRY2Q49AN0 593 aa26.51■■□□□ 1.83
SMAD1-201ENST00000302085 STRBPQ96SI9 672 aaKnown RBP26.51■■□□□ 1.83
SMAD1-201ENST00000302085 DDX11L8A8MPP1 907 aa26.5■■□□□ 1.83
SMAD1-201ENST00000302085 BAG4O95429 457 aaKnown RBP26.5■■□□□ 1.83
SMAD1-201ENST00000302085 HMGB1P09429 215 aaKnown RBP26.5■■□□□ 1.83
SMAD1-201ENST00000302085 COL23A1Q86Y22 540 aaPredicted RBP26.5■■□□□ 1.83
SMAD1-201ENST00000302085 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.5■■□□□ 1.83
SMAD1-201ENST00000302085 BRD1O95696 1058 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 POTEAQ6S8J7 498 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 DHX32Q7L7V1 743 aaKnown RBP26.49■■□□□ 1.83
SMAD1-201ENST00000302085 SLC51AQ86UW1 340 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 VPS37DQ86XT2 251 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 NECAB1Q8N987 351 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 COL1A1P02452 1464 aaPredicted RBP26.49■■□□□ 1.83
SMAD1-201ENST00000302085 EXOSC10Q01780 885 aaKnown RBP26.49■■□□□ 1.83
SMAD1-201ENST00000302085 Q6ZUG5 572 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 LRP2BPQ9P2M1 347 aa26.49■■□□□ 1.83
SMAD1-201ENST00000302085 IMMTQ16891 758 aaKnown RBP26.48■■□□□ 1.83
SMAD1-201ENST00000302085 HAND2P61296 217 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 RPGRQ92834 1020 aaKnown RBP26.47■■□□□ 1.83
SMAD1-201ENST00000302085 AIDAQ96BJ3 306 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 DENND2AQ9ULE3 1009 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 LAMA4Q16363 1823 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 IRS2Q9Y4H2 1338 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 SMC3Q9UQE7 1217 aa26.47■■□□□ 1.83
SMAD1-201ENST00000302085 HIBADHP31937 336 aaKnown RBP26.46■■□□□ 1.83
SMAD1-201ENST00000302085 TXNRD3Q86VQ6 643 aa26.46■■□□□ 1.83
SMAD1-201ENST00000302085 LRRC2Q9BYS8 371 aa26.46■■□□□ 1.83
SMAD1-201ENST00000302085 SEMA3EO15041 775 aa26.45■■□□□ 1.82
SMAD1-201ENST00000302085 MBD4O95243 580 aa26.45■■□□□ 1.82
SMAD1-201ENST00000302085 FOXD4L5Q5VV16 416 aaPredicted RBP26.45■■□□□ 1.82
SMAD1-201ENST00000302085 FOXD4L4Q8WXT5 416 aaPredicted RBP26.45■■□□□ 1.82
SMAD1-201ENST00000302085 ABCF2Q9UG63 623 aa26.45■■□□□ 1.82
SMAD1-201ENST00000302085 NLGN1Q8N2Q7 840 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 RBM17Q96I25 401 aaKnown RBP26.44■■□□□ 1.82
SMAD1-201ENST00000302085 ARMT1Q9H993 441 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 ZNF213O14771 459 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 TRAK2O60296 914 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 DTNBO60941 627 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 APPP05067 770 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 ALX1Q15699 326 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 ANKIB1Q9P2G1 1089 aa26.44■■□□□ 1.82
SMAD1-201ENST00000302085 KLRG2A4D1S0 409 aaPredicted RBP26.43■■□□□ 1.82
SMAD1-201ENST00000302085 PATL2C9JE40 543 aaKnown RBP26.43■■□□□ 1.82
SMAD1-201ENST00000302085 NBPF3Q9H094 633 aa26.43■■□□□ 1.82
SMAD1-201ENST00000302085 LEMD3Q9Y2U8 911 aa26.43■■□□□ 1.82
SMAD1-201ENST00000302085 GJB2P29033 226 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 HOXA10P31260 410 aaPredicted RBP26.42■■□□□ 1.82
SMAD1-201ENST00000302085 BRF1Q92994 677 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 AGXT2Q9BYV1 514 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 RAI14Q9P0K7 980 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 CYP7A1P22680 504 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 FLAD1Q8NFF5 587 aa26.42■■□□□ 1.82
SMAD1-201ENST00000302085 TNS1Q9HBL0 1735 aaKnown RBP26.41■■□□□ 1.82
SMAD1-201ENST00000302085 DEKP35659 375 aaKnown RBP26.41■■□□□ 1.82
SMAD1-201ENST00000302085 GSE1Q14687 1217 aa26.41■■□□□ 1.82
SMAD1-201ENST00000302085 ADGRA1Q86SQ6 560 aa26.41■■□□□ 1.82
SMAD1-201ENST00000302085 LCORLQ8N3X6 602 aa26.41■■□□□ 1.82
SMAD1-201ENST00000302085 XDHP47989 1333 aa26.41■■□□□ 1.82
SMAD1-201ENST00000302085 PDS5AQ29RF7 1337 aaKnown RBP26.41■■□□□ 1.82
SMAD1-201ENST00000302085 STK3Q13188 491 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 CHST3Q7LGC8 479 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 IFNL3Q8IZI9 196 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 PNPLA7Q6ZV29 1317 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 WDR33Q9C0J8 1336 aaKnown RBP26.4■■□□□ 1.82
SMAD1-201ENST00000302085 GSG1L2A8MUP6 293 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 PRKAB2O43741 272 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 SYT1P21579 422 aa26.4■■□□□ 1.82
SMAD1-201ENST00000302085 GPSM2P81274 684 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms