RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 ATF7IPQ6VMQ6 1270 aa7□□□□□ -1.29
PATL1-201ENST00000300146 CDCA5Q96FF9 252 aa7□□□□□ -1.29
PATL1-201ENST00000300146 FAM84BQ96KN1 310 aaPredicted RBP7□□□□□ -1.29
PATL1-201ENST00000300146 TAOK2Q9UL54 1235 aa7□□□□□ -1.29
PATL1-201ENST00000300146 CSF1RP07333 972 aa7□□□□□ -1.29
PATL1-201ENST00000300146 SLC5A1P13866 664 aa7□□□□□ -1.29
PATL1-201ENST00000300146 PHKA1P46020 1223 aa7□□□□□ -1.29
PATL1-201ENST00000300146 DZIP1LQ8IYY4 767 aaKnown RBP7□□□□□ -1.29
PATL1-201ENST00000300146 PNMA6EA0A0J9YXQ4 647 aa7□□□□□ -1.29
PATL1-201ENST00000300146 EYA2O00167 538 aa7□□□□□ -1.29
PATL1-201ENST00000300146 VIL1P09327 827 aaKnown RBP7□□□□□ -1.29
PATL1-201ENST00000300146 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
PATL1-201ENST00000300146 ANKRD44Q8N8A2 993 aa7□□□□□ -1.29
PATL1-201ENST00000300146 DEFB129Q9H1M3 183 aa7□□□□□ -1.29
PATL1-201ENST00000300146 ZC3H4Q9UPT8 1303 aaKnown RBP6.99□□□□□ -1.29
PATL1-201ENST00000300146 CCDC88AQ3V6T2 1871 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 RASA3Q14644 834 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 GRIPAP1Q4V328 841 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 DACT2Q5SW24 774 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 RTFDC1Q9BY42 306 aaPredicted RBP6.99□□□□□ -1.29
PATL1-201ENST00000300146 TMEM39BQ9GZU3 492 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 RTN4Q9NQC3 1192 aaKnown RBP6.99□□□□□ -1.29
PATL1-201ENST00000300146 NUP98P52948 1817 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 COL4A5P29400 1685 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 PDE8BO95263 885 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 GNAI2P04899 355 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 PRDX5P30044 214 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 CLMNQ96JQ2 1002 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 TMOD2Q9NZR1 351 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 LRP2BPQ9P2M1 347 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 FAM196BA6NMK8 535 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 RAD21O60216 631 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 TBC1D8O95759 1140 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 KIF23Q02241 960 aaPredicted RBP6.99□□□□□ -1.29
PATL1-201ENST00000300146 SAPCD2Q86UD0 394 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 DZIP1Q86YF9 867 aaKnown RBP6.99□□□□□ -1.29
PATL1-201ENST00000300146 DPF2Q92785 391 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
PATL1-201ENST00000300146 PTPRCP08575 1304 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 GNAI3P08754 354 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 ECE1P42892 770 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 PTPN12Q05209 780 aaKnown RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 C20orf194Q5TEA3 1177 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 STRIP1Q5VSL9 837 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 ANKRD31Q8N7Z5 1873 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 TNRC6CQ9HCJ0 1690 aaKnown RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 CNKSR2Q8WXI2 1034 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 ZNF521Q96K83 1311 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 KIF16BQ96L93 1317 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 SIPA1L3O60292 1781 aaPredicted RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 RGL2O15211 777 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 IDH1O75874 414 aaKnown RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 GNL3LQ9NVN8 582 aaKnown RBP6.98□□□□□ -1.29
PATL1-201ENST00000300146 RCAN3Q9UKA8 241 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 RIPOR2Q9Y4F9 1068 aa6.98□□□□□ -1.29
PATL1-201ENST00000300146 PPP1R12BO60237 982 aaPredicted RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 ALDH1L2Q3SY69 923 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 DNAJC2Q99543 621 aaKnown RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 A0A1B0GUL7 405 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 CRKP46108 304 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 RGMBQ6NW40 437 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 UBR2Q8IWV8 1755 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 COL11A2P13942 1736 aaPredicted RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 UBE4AQ14139 1066 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 PUM3Q15397 648 aaKnown RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 TTC39AQ5SRH9 613 aa6.97□□□□□ -1.29
PATL1-201ENST00000300146 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
PATL1-201ENST00000300146 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 RPS12P25398 132 aaKnown RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 OTUD5Q96G74 571 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 XAGE2Q96GT9 111 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 PDE4DIPQ5VU43 2346 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 MKI67P46013 3256 aaKnown RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 IBTKQ9P2D0 1353 aaPredicted RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 MIGA1Q8NAN2 632 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 ZKSCAN4Q969J2 545 aaPredicted RBP6.96□□□□□ -1.29
PATL1-201ENST00000300146 USP40Q9NVE5 1235 aa6.96□□□□□ -1.29
PATL1-201ENST00000300146 MAP4K4O95819 1239 aaPredicted RBP6.96□□□□□ -1.3
PATL1-201ENST00000300146 CCDC102BQ68D86 513 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 ARMC9Q7Z3E5 817 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 TEKT1Q969V4 418 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 DBNDD2Q9BQY9 259 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.3
PATL1-201ENST00000300146 COL4A1P02462 1669 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 DGKZQ13574 1117 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 AACSQ86V21 672 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 LPIN2Q92539 896 aa6.96□□□□□ -1.3
PATL1-201ENST00000300146 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.96□□□□□ -1.3
PATL1-201ENST00000300146 SLC4A3P48751 1232 aa6.95□□□□□ -1.3
PATL1-201ENST00000300146 CTCFP49711 727 aaPredicted RBP6.95□□□□□ -1.3
PATL1-201ENST00000300146 MAP2K1Q02750 393 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms