RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SPATS2LQ9NUQ6 558 aaKnown RBP16.74■□□□□ 0.27
SCN3B-201ENST00000299333 BAIAP2L1Q9UHR4 511 aa16.74■□□□□ 0.27
SCN3B-201ENST00000299333 FYB2Q5VWT5 728 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
SCN3B-201ENST00000299333 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 MICAL1Q8TDZ2 1067 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 MCUR1Q96AQ8 359 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 MRPS9P82933 396 aaKnown RBP16.73■□□□□ 0.27
SCN3B-201ENST00000299333 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 UTP14CQ5TAP6 766 aaKnown RBP16.73■□□□□ 0.27
SCN3B-201ENST00000299333 PFDN1O60925 122 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
SCN3B-201ENST00000299333 VSIG1Q86XK7 387 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
SCN3B-201ENST00000299333 ATP5DP30049 168 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 ZNF354CQ86Y25 554 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 CNPY4Q8N129 248 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 CCDC26Q8TAB7 109 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 LRRC45Q96CN5 670 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 TTC36A6NLP5 189 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 TXNDC9O14530 226 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 HSPA1LP34931 641 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 PDE4BQ07343 736 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 ZSCAN26Q16670 478 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 CCDC170Q8IYT3 715 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
SCN3B-201ENST00000299333 MRFAP1L1Q96HT8 127 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 TACO1Q9BSH4 297 aaKnown RBP16.72■□□□□ 0.27
SCN3B-201ENST00000299333 PSMD6Q15008 389 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 ZNF365Q70YC5 407 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 GOLGA6BA6NDN3 693 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 PDE1AP54750 535 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 PPP2R5AQ15172 486 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 LRRC43Q8N309 656 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 MAP3K2Q9Y2U5 619 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
SCN3B-201ENST00000299333 RTN1Q16799 776 aa16.71■□□□□ 0.27
SCN3B-201ENST00000299333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCN3B-201ENST00000299333 ERMNQ8TAM6 284 aa16.71■□□□□ 0.27
SCN3B-201ENST00000299333 CCT6AP40227 531 aaKnown RBP16.71■□□□□ 0.27
SCN3B-201ENST00000299333 AK2P54819 239 aa16.71■□□□□ 0.27
SCN3B-201ENST00000299333 MTUS1Q9ULD2 1270 aa16.71■□□□□ 0.27
SCN3B-201ENST00000299333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
SCN3B-201ENST00000299333 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 MYL5Q02045 173 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 SH2D4BQ5SQS7 431 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
SCN3B-201ENST00000299333 FAM169AQ9Y6X4 670 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 JAKMIP2Q96AA8 810 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 A6NNZ2 444 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 E7EVH7 732 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 GMNNO75496 209 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 ERCC5P28715 1186 aaPredicted RBP16.7■□□□□ 0.26
SCN3B-201ENST00000299333 MCM7P33993 719 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 TUBB8Q3ZCM7 444 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 USP37Q86T82 979 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
SCN3B-201ENST00000299333 TSC1Q92574 1164 aa16.7■□□□□ 0.26
SCN3B-201ENST00000299333 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
SCN3B-201ENST00000299333 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 HEATR3Q7Z4Q2 680 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 SDCCAG8Q86SQ7 713 aaPredicted RBP16.69■□□□□ 0.26
SCN3B-201ENST00000299333 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
SCN3B-201ENST00000299333 NUF2Q9BZD4 464 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 CAPN7Q9Y6W3 813 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 PROSER2Q86WR7 435 aaPredicted RBP16.69■□□□□ 0.26
SCN3B-201ENST00000299333 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
SCN3B-201ENST00000299333 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
SCN3B-201ENST00000299333 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 IGSF22Q8N9C0 903 aa16.69■□□□□ 0.26
SCN3B-201ENST00000299333 GBP5Q96PP8 586 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 A0A1B0GVL5 298 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 MIER3Q7Z3K6 550 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 STK38LQ9Y2H1 464 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 ERCC6LQ2NKX8 1250 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 IFIT1BQ5T764 474 aaKnown RBP16.68■□□□□ 0.26
SCN3B-201ENST00000299333 STX8Q9UNK0 236 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
SCN3B-201ENST00000299333 CLUL1Q15846 466 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 INF2Q27J81 1249 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 TRIM31Q9BZY9 425 aa16.68■□□□□ 0.26
SCN3B-201ENST00000299333 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 GPR161Q8N6U8 529 aaKnown RBP16.67■□□□□ 0.26
SCN3B-201ENST00000299333 KRT23Q9C075 422 aa16.67■□□□□ 0.26
SCN3B-201ENST00000299333 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms