RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 KIF23Q02241 960 aaPredicted RBP12.01□□□□□ -0.49
CNOT9-202ENST00000295701 NOGQ13253 232 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 DGKZQ13574 1117 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 C2orf69Q8N8R5 385 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
CNOT9-202ENST00000295701 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
CNOT9-202ENST00000295701 IFT57Q9NWB7 429 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 GGA3Q9NZ52 723 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 PSME4Q14997 1843 aa12.01□□□□□ -0.49
CNOT9-202ENST00000295701 CA12O43570 354 aa12□□□□□ -0.49
CNOT9-202ENST00000295701 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
CNOT9-202ENST00000295701 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
CNOT9-202ENST00000295701 SCARF1Q14162 830 aa12□□□□□ -0.49
CNOT9-202ENST00000295701 CCDC152Q4G0S7 254 aa12□□□□□ -0.49
CNOT9-202ENST00000295701 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
CNOT9-202ENST00000295701 METTL22Q9BUU2 404 aaPredicted RBP12□□□□□ -0.49
CNOT9-202ENST00000295701 CWC25Q9NXE8 425 aaPredicted RBP12□□□□□ -0.49
CNOT9-202ENST00000295701 IGKV5-2P06315 115 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 RGS19P49795 217 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 GNAI1P63096 354 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNOT9-202ENST00000295701 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
CNOT9-202ENST00000295701 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 CDCA5Q96FF9 252 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
CNOT9-202ENST00000295701 MXD3Q9BW11 206 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 MAP3K2Q9Y2U5 619 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 MYH3P11055 1940 aa11.99□□□□□ -0.49
CNOT9-202ENST00000295701 TRPA1O75762 1119 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 ZNF280AP59817 542 aaPredicted RBP11.98□□□□□ -0.49
CNOT9-202ENST00000295701 MLLT1Q03111 559 aaPredicted RBP11.98□□□□□ -0.49
CNOT9-202ENST00000295701 CCDC184Q52MB2 194 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 ANGEL2Q5VTE6 544 aaKnown RBP11.98□□□□□ -0.49
CNOT9-202ENST00000295701 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 ANKRD18AQ8IVF6 992 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 CSRNP1Q96S65 589 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 GMLQ99445 158 aa11.98□□□□□ -0.49
CNOT9-202ENST00000295701 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 G2E3Q7L622 706 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 AGBL3Q8NEM8 1001 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 TTLL11Q8NHH1 800 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 TSR2Q969E8 191 aaKnown RBP11.97□□□□□ -0.49
CNOT9-202ENST00000295701 GREM2Q9H772 168 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 RNF186Q9NXI6 227 aa11.97□□□□□ -0.49
CNOT9-202ENST00000295701 TNRC18O15417 2968 aaPredicted RBP11.97□□□□□ -0.49
CNOT9-202ENST00000295701 XDHP47989 1333 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 ZNF646O15015 1829 aaPredicted RBP11.96□□□□□ -0.49
CNOT9-202ENST00000295701 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 SLC10A3P09131 477 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 ATP2B4P23634 1241 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 CTSWP56202 376 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 CWF19L2Q2TBE0 894 aaKnown RBP11.96□□□□□ -0.49
CNOT9-202ENST00000295701 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 TXNRD3Q86VQ6 643 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
CNOT9-202ENST00000295701 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
CNOT9-202ENST00000295701 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
CNOT9-202ENST00000295701 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
CNOT9-202ENST00000295701 USP17L8P0C7I0 530 aa11.95□□□□□ -0.5
CNOT9-202ENST00000295701 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
CNOT9-202ENST00000295701 NBPF9Q3BBW0 867 aa11.95□□□□□ -0.5
CNOT9-202ENST00000295701 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
CNOT9-202ENST00000295701 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
CNOT9-202ENST00000295701 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
CNOT9-202ENST00000295701 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
CNOT9-202ENST00000295701 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
CNOT9-202ENST00000295701 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
CNOT9-202ENST00000295701 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
CNOT9-202ENST00000295701 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
CNOT9-202ENST00000295701 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 H7C1W4 665 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 KLRK1P26718 216 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
CNOT9-202ENST00000295701 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
CNOT9-202ENST00000295701 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
CNOT9-202ENST00000295701 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 ZNF609O15014 1411 aa11.93□□□□□ -0.5
CNOT9-202ENST00000295701 SNAP23O00161 211 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 WNT10BO00744 389 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 SOX10P56693 466 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 MFSD10Q14728 455 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 PAPPA2Q9BXP8 1791 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 PDE4DIPQ5VU43 2346 aa11.92□□□□□ -0.5
CNOT9-202ENST00000295701 SASH1O94885 1247 aa11.91□□□□□ -0.5
CNOT9-202ENST00000295701 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms