RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 LNPKQ9C0E8 428 aa27.67■■■□□ 2.02
LINC01116-201ENST00000295549 TIAM2Q8IVF5 1701 aa27.66■■■□□ 2.02
LINC01116-201ENST00000295549 GLTPD2A6NH11 291 aa27.66■■■□□ 2.02
LINC01116-201ENST00000295549 RASGRF1Q13972 1273 aa27.66■■■□□ 2.02
LINC01116-201ENST00000295549 C16orf71Q8IYS4 520 aaPredicted RBP27.66■■■□□ 2.02
LINC01116-201ENST00000295549 PDS5AQ29RF7 1337 aaKnown RBP27.65■■■□□ 2.02
LINC01116-201ENST00000295549 DACT2Q5SW24 774 aa27.65■■■□□ 2.02
LINC01116-201ENST00000295549 SCN9AQ15858 1988 aa27.64■■■□□ 2.02
LINC01116-201ENST00000295549 MCAMP43121 646 aa27.63■■■□□ 2.01
LINC01116-201ENST00000295549 FKBP1AP62942 108 aaKnown RBP27.63■■■□□ 2.01
LINC01116-201ENST00000295549 RSBN1LQ6PCB5 846 aaPredicted RBP27.63■■■□□ 2.01
LINC01116-201ENST00000295549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.63■■■□□ 2.01
LINC01116-201ENST00000295549 DDNO94850 711 aaPredicted RBP27.62■■■□□ 2.01
LINC01116-201ENST00000295549 SPATA5Q8NB90 893 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 WDR66Q8TBY9 1149 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 OTUD7AQ8TE49 926 aaPredicted RBP27.62■■■□□ 2.01
LINC01116-201ENST00000295549 TBC1D22AQ8WUA7 517 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 FBXW7Q969H0 707 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 GPATCH3Q96I76 525 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 ECHDC1Q9NTX5 307 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 HMG20BQ9P0W2 317 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 GJA3Q9Y6H8 435 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 SALL3Q9BXA9 1300 aa27.62■■■□□ 2.01
LINC01116-201ENST00000295549 ATP5JP18859 108 aa27.61■■■□□ 2.01
LINC01116-201ENST00000295549 RPS12P25398 132 aaKnown RBP27.61■■■□□ 2.01
LINC01116-201ENST00000295549 CHAF1AQ13111 956 aaPredicted RBP27.61■■■□□ 2.01
LINC01116-201ENST00000295549 SCARF1Q14162 830 aa27.61■■■□□ 2.01
LINC01116-201ENST00000295549 AGBL3Q8NEM8 1001 aa27.61■■■□□ 2.01
LINC01116-201ENST00000295549 MYO3BQ8WXR4 1341 aa27.61■■■□□ 2.01
LINC01116-201ENST00000295549 COL1A1P02452 1464 aaPredicted RBP27.61■■■□□ 2.01
LINC01116-201ENST00000295549 TTC41PQ6P2S7 1318 aa27.6■■■□□ 2.01
LINC01116-201ENST00000295549 MX1P20591 662 aa27.6■■■□□ 2.01
LINC01116-201ENST00000295549 L3MBTL3Q96JM7 780 aaPredicted RBP27.6■■■□□ 2.01
LINC01116-201ENST00000295549 GMLQ99445 158 aa27.6■■■□□ 2.01
LINC01116-201ENST00000295549 JAG2Q9Y219 1238 aa27.6■■■□□ 2.01
LINC01116-201ENST00000295549 SALL1Q9NSC2 1324 aa27.59■■■□□ 2.01
LINC01116-201ENST00000295549 MFSD14BQ5SR56 506 aa27.59■■■□□ 2.01
LINC01116-201ENST00000295549 DPF2Q92785 391 aa27.59■■■□□ 2.01
LINC01116-201ENST00000295549 STAP2Q9UGK3 403 aa27.59■■■□□ 2.01
LINC01116-201ENST00000295549 PI16Q6UXB8 463 aa27.58■■■□□ 2.01
LINC01116-201ENST00000295549 CERS5Q8N5B7 392 aa27.58■■■□□ 2.01
LINC01116-201ENST00000295549 ZBTB12Q9Y330 459 aaPredicted RBP27.58■■■□□ 2.01
LINC01116-201ENST00000295549 MXD3Q9BW11 206 aa27.58■■■□□ 2
LINC01116-201ENST00000295549 GMPSP49915 693 aaPredicted RBP27.57■■■□□ 2
LINC01116-201ENST00000295549 PDE1AP54750 535 aa27.57■■■□□ 2
LINC01116-201ENST00000295549 ZGPATQ8N5A5 531 aaKnown RBP27.57■■■□□ 2
LINC01116-201ENST00000295549 SUGT1Q9Y2Z0 365 aa27.57■■■□□ 2
LINC01116-201ENST00000295549 PSME4Q14997 1843 aa27.57■■■□□ 2
LINC01116-201ENST00000295549 ERC2O15083 957 aa27.56■■■□□ 2
LINC01116-201ENST00000295549 SNRKQ9NRH2 765 aa27.56■■■□□ 2
LINC01116-201ENST00000295549 ZAP70P43403 619 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 MMP14P50281 582 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 SCNN1DP51172 638 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 PLEKHM2Q8IWE5 1019 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 HAUS7Q99871 368 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 BOLA2Q9H3K6 86 aa27.55■■■□□ 2
LINC01116-201ENST00000295549 GLRX3O76003 335 aaKnown RBP27.54■■■□□ 2
LINC01116-201ENST00000295549 TSHZ3Q63HK5 1081 aa27.54■■■□□ 2
LINC01116-201ENST00000295549 PI4K2BQ8TCG2 481 aa27.54■■■□□ 2
LINC01116-201ENST00000295549 OSBPL3Q9H4L5 887 aa27.54■■■□□ 2
LINC01116-201ENST00000295549 GPRC5DQ9NZD1 345 aa27.54■■■□□ 2
LINC01116-201ENST00000295549 CYP2E1P05181 493 aaPredicted RBP27.53■■■□□ 2
LINC01116-201ENST00000295549 YY1P25490 414 aa27.53■■■□□ 2
LINC01116-201ENST00000295549 PDE4AP27815 886 aa27.53■■■□□ 2
LINC01116-201ENST00000295549 ZNF646O15015 1829 aaPredicted RBP27.53■■■□□ 2
LINC01116-201ENST00000295549 AOX1Q06278 1338 aa27.53■■■□□ 2
LINC01116-201ENST00000295549 USP17L8P0C7I0 530 aa27.52■■■□□ 2
LINC01116-201ENST00000295549 SPTY2D1Q68D10 685 aaPredicted RBP27.52■■■□□ 2
LINC01116-201ENST00000295549 CNOT7Q9UIV1 285 aaKnown RBP27.52■■■□□ 2
LINC01116-201ENST00000295549 KIAA0825Q8IV33 1275 aa27.51■■□□□ 1.99
LINC01116-201ENST00000295549 ABCF2Q9UG63 623 aa27.51■■□□□ 1.99
LINC01116-201ENST00000295549 AKAP11Q9UKA4 1901 aa27.51■■□□□ 1.99
LINC01116-201ENST00000295549 IQCA1LA6NCM1 817 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 POTECB2RU33 542 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 IGSF3O75054 1194 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 LDHBP07195 334 aaKnown RBP27.5■■□□□ 1.99
LINC01116-201ENST00000295549 LMOD1P29536 600 aaPredicted RBP27.5■■□□□ 1.99
LINC01116-201ENST00000295549 ZNF280AP59817 542 aaPredicted RBP27.5■■□□□ 1.99
LINC01116-201ENST00000295549 GRIK5Q16478 980 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 TBC1D9Q6ZT07 1266 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 MICALL2Q8IY33 904 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 OGFOD1Q8N543 542 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 DNAJC2Q99543 621 aaKnown RBP27.5■■□□□ 1.99
LINC01116-201ENST00000295549 NDUFB9Q9Y6M9 179 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 PRDX5P30044 214 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 TTF1Q15361 905 aaPredicted RBP27.5■■□□□ 1.99
LINC01116-201ENST00000295549 HACL1Q9UJ83 578 aa27.5■■□□□ 1.99
LINC01116-201ENST00000295549 WDR90Q96KV7 1748 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 H7C1D1 291 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 ERICH6Q7L0X2 663 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 MRIQ9BWK5 157 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 ANTXR1Q9H6X2 564 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 PAG1Q9NWQ8 432 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 HDAC9Q9UKV0 1011 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 TTF2Q9UNY4 1162 aaKnown RBP27.49■■□□□ 1.99
LINC01116-201ENST00000295549 MYH13Q9UKX3 1938 aa27.49■■□□□ 1.99
LINC01116-201ENST00000295549 F8W031 263 aaPredicted RBP27.48■■□□□ 1.99
LINC01116-201ENST00000295549 GOLIM4O00461 696 aa27.48■■□□□ 1.99
LINC01116-201ENST00000295549 VEGFAP15692 232 aaPredicted RBP27.48■■□□□ 1.99
LINC01116-201ENST00000295549 EPS15P42566 896 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms