RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KIF3AQ9Y496 699 aa23.42■■□□□ 1.34
SCUBE1-201ENST00000290460 RBM10P98175 930 aaKnown RBP23.41■■□□□ 1.34
SCUBE1-201ENST00000290460 GOLPH3LQ9H4A5 285 aa23.41■■□□□ 1.34
SCUBE1-201ENST00000290460 CTNNA3Q9UI47 895 aa23.41■■□□□ 1.34
SCUBE1-201ENST00000290460 GPAA1O43292 621 aa23.4■■□□□ 1.34
SCUBE1-201ENST00000290460 OTUD7BQ6GQQ9 843 aa23.4■■□□□ 1.34
SCUBE1-201ENST00000290460 CCAR1Q8IX12 1150 aaKnown RBP23.4■■□□□ 1.34
SCUBE1-201ENST00000290460 RCOR1Q9UKL0 485 aa23.4■■□□□ 1.34
SCUBE1-201ENST00000290460 PRC1O43663 620 aa23.39■■□□□ 1.34
SCUBE1-201ENST00000290460 CNNM1Q9NRU3 951 aa23.39■■□□□ 1.34
SCUBE1-201ENST00000290460 PYCARDQ9ULZ3 195 aa23.39■■□□□ 1.34
SCUBE1-201ENST00000290460 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.34
SCUBE1-201ENST00000290460 ZNF165P49910 485 aa23.39■■□□□ 1.33
SCUBE1-201ENST00000290460 CTSWP56202 376 aa23.39■■□□□ 1.33
SCUBE1-201ENST00000290460 MB21D2Q8IYB1 491 aaPredicted RBP23.39■■□□□ 1.33
SCUBE1-201ENST00000290460 NUP98P52948 1817 aa23.39■■□□□ 1.33
SCUBE1-201ENST00000290460 ANTXR2P58335 489 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 SYTL4Q96C24 671 aaPredicted RBP23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 DENND2AQ9ULE3 1009 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 CDHR2Q9BYE9 1310 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 ANKRD36CQ5JPF3 1778 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 KLF18A0A0U1RQI7 1052 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 EVCP57679 992 aa23.38■■□□□ 1.33
SCUBE1-201ENST00000290460 IRS4O14654 1257 aaPredicted RBP23.37■■□□□ 1.33
SCUBE1-201ENST00000290460 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
SCUBE1-201ENST00000290460 FBXL16Q8N461 479 aa23.37■■□□□ 1.33
SCUBE1-201ENST00000290460 TRMT112Q9UI30 125 aaKnown RBP23.37■■□□□ 1.33
SCUBE1-201ENST00000290460 GOLGA8BA8MQT2 603 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 PTGS1P23219 599 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 SNW1Q13573 536 aaKnown RBP23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 GJB4Q9NTQ9 266 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 HPS5Q9UPZ3 1129 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 LRP6O75581 1613 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 A0A087WWV3 80 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 ANKRD18BA2A2Z9 1011 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 ME1P48163 572 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 NKX2-3Q8TAU0 364 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 ZNF396Q96N95 335 aaPredicted RBP23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 TBC1D2BQ9UPU7 963 aa23.36■■□□□ 1.33
SCUBE1-201ENST00000290460 NHSL1Q5SYE7 1610 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 ZNF213O14771 459 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 VGLL2Q8N8G2 317 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 TDRD7Q8NHU6 1098 aaKnown RBP23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 NCOA7Q8NI08 942 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 TRIM5Q9C035 493 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 SPTLC3Q9NUV7 552 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 FAM13BQ9NYF5 915 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 GOLGA6L6A8MZA4 724 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 RALYLQ86SE5 291 aaKnown RBP23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 KIAA1524Q8TCG1 905 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 NBPF3Q9H094 633 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 PIH1D3Q9NQM4 214 aaKnown RBP23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 BCL9O00512 1426 aa23.35■■□□□ 1.33
SCUBE1-201ENST00000290460 ABCC12Q96J65 1359 aa23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 IDH1O75874 414 aaKnown RBP23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 ADD2P35612 726 aa23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 CCDC73Q6ZRK6 1079 aa23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 ERCC4Q92889 916 aaPredicted RBP23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 NRBP1Q9UHY1 535 aa23.34■■□□□ 1.33
SCUBE1-201ENST00000290460 POLR3DP05423 398 aaPredicted RBP23.33■■□□□ 1.33
SCUBE1-201ENST00000290460 PHKA1P46020 1223 aa23.33■■□□□ 1.33
SCUBE1-201ENST00000290460 FSIP1Q8NA03 581 aa23.33■■□□□ 1.33
SCUBE1-201ENST00000290460 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.33
SCUBE1-201ENST00000290460 ZNF75DP51815 510 aa23.33■■□□□ 1.32
SCUBE1-201ENST00000290460 DRC7Q8IY82 874 aa23.33■■□□□ 1.32
SCUBE1-201ENST00000290460 ENGASEQ8NFI3 743 aa23.33■■□□□ 1.32
SCUBE1-201ENST00000290460 C8orf76Q96K31 380 aa23.33■■□□□ 1.32
SCUBE1-201ENST00000290460 UBN2Q6ZU65 1347 aa23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 PDE8BO95263 885 aa23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 CCDC186Q7Z3E2 898 aa23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 PLA2G4DQ86XP0 818 aa23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 ORC3Q9UBD5 711 aaPredicted RBP23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 PCDHA7Q9UN72 937 aa23.32■■□□□ 1.32
SCUBE1-201ENST00000290460 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 ATL3Q6DD88 541 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 TBC1D10CQ8IV04 446 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 KINO60870 393 aaKnown RBP23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 APPP05067 770 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 TPM3P06753 285 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 CLIC4Q9Y696 253 aa23.31■■□□□ 1.32
SCUBE1-201ENST00000290460 CPLX1O14810 134 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 LRMPQ12912 555 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 DZIP3Q86Y13 1208 aaKnown RBP23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 WWC3Q9ULE0 1092 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 ZNF532Q9HCE3 1301 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 C4AP0C0L4 1744 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 IQCB1Q15051 598 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 FBXO18Q8NFZ0 1043 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 CHMP4CQ96CF2 233 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 TAOK2Q9UL54 1235 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
SCUBE1-201ENST00000290460 SNAP23O00161 211 aa23.29■■□□□ 1.32
SCUBE1-201ENST00000290460 DYNC1I1O14576 645 aa23.29■■□□□ 1.32
SCUBE1-201ENST00000290460 DHX16O60231 1041 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms