RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 EVI5LQ96CN4 794 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 MEIS3Q99687 375 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 GSDMDP57764 484 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 SERPINB2P05120 415 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 MYRIPQ8NFW9 859 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 RASSF4Q9H2L5 321 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 DDX19AQ9NUU7 478 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 ZSWIM4Q9H7M6 989 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 MED14O60244 1454 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 GOLIM4O00461 696 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 PDE4BQ07343 736 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
NPC1L1-201ENST00000289547 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 SKILP12757 684 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 CYP27B1O15528 508 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 KIF5CO60282 957 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 STX6O43752 255 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 ARFGAP3Q9NP61 516 aa13.09□□□□□ -0.31
NPC1L1-201ENST00000289547 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.31
NPC1L1-201ENST00000289547 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.31
NPC1L1-201ENST00000289547 IQCA1Q86XH1 822 aa13.08□□□□□ -0.31
NPC1L1-201ENST00000289547 IVLP07476 585 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 TSC1Q92574 1164 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 MYO6Q9UM54 1294 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 CDKL5O76039 1030 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 DYDC1Q8WWB3 177 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 TMX3Q96JJ7 454 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 IQCEQ6IPM2 695 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 SNRKQ9NRH2 765 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 CPDO75976 1380 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.32
NPC1L1-201ENST00000289547 KCNQ3O43525 872 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 CYP7A1P22680 504 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 GCKRQ14397 625 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 H7C1D1 291 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 EYA2O00167 538 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 MCM6Q14566 821 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 ANKRD44Q8N8A2 993 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 CAPN2P17655 700 aa13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 GIGYF2Q6Y7W6 1299 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
NPC1L1-201ENST00000289547 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 GNG11P61952 73 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 GABPB1Q06547 395 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 PTGS1P23219 599 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 GTF3C6Q969F1 213 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 ZNF213O14771 459 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
NPC1L1-201ENST00000289547 CTAGE5O15320 804 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms