RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 PSMA7O14818 248 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 FAM160A1Q05DH4 1040 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 PPP1R9BQ96SB3 815 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 HDXQ7Z353 690 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 GJC1P36383 396 aa17.39■□□□□ 0.37
SHROOM4-201ENST00000289292 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 ESR2Q92731 530 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 KRT86O43790 486 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 MYL5Q02045 173 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 OTUD6BQ8N6M0 293 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 CRNKL1Q9BZJ0 848 aaKnown RBP17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 PZPP20742 1482 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 ZNF174Q15697 407 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 CNNM2Q9H8M5 875 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 KRT83P78385 493 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC121Q6ZUS5 278 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 VPS16Q9H269 839 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 NUP153P49790 1475 aaKnown RBP17.38■□□□□ 0.37
SHROOM4-201ENST00000289292 EBAG9O00559 213 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 IFI16Q16666 785 aaKnown RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC42Q96M95 316 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 MAPK8IP1Q9UQF2 711 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 GAS2L3Q86XJ1 694 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 SELENOOQ9BVL4 669 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 ELP1O95163 1332 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 VWA3AA6NCI4 1184 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 NAPAP54920 295 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 FANCCQ00597 558 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 LEO1Q8WVC0 666 aaPredicted RBP17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
SHROOM4-201ENST00000289292 JAK2O60674 1132 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 KIF4AO95239 1232 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 SPAG1Q07617 926 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC122Q5T0U0 273 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 FAM76AQ8TAV0 307 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 CETN1Q12798 172 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 BRAPQ7Z569 592 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 JAG2Q9Y219 1238 aa17.36■□□□□ 0.37
SHROOM4-201ENST00000289292 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 EYA1Q99502 592 aa17.35■□□□□ 0.37
SHROOM4-201ENST00000289292 A0A1B0GUL7 405 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 UBLCP1Q8WVY7 318 aaPredicted RBP17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 MRVI1Q9Y6F6 885 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 ATP10BO94823 1461 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 TLDC2A0PJX2 215 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 B4E1Z4 1266 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 TUBB4AP04350 444 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 HPDP32754 393 aaPredicted RBP17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 PICALMQ13492 652 aa17.34■□□□□ 0.37
SHROOM4-201ENST00000289292 PPP4R3AQ6IN85 833 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 FERMT2Q96AC1 680 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 A2MP01023 1474 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 BMP15O95972 392 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 NEK11Q8NG66 645 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC114Q96M63 670 aa17.33■□□□□ 0.37
SHROOM4-201ENST00000289292 CCDC25Q86WR0 208 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 TMTC2Q8N394 836 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 NSRP1Q9H0G5 558 aaKnown RBP17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 HOMER2Q9NSB8 354 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 BAG3O95817 575 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 FAM170AA1A519 330 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 TIMM10P62072 90 aa17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 SF3A3Q12874 501 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
SHROOM4-201ENST00000289292 BICD1Q96G01 975 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms