RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 GPTP24298 496 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 KARSQ15046 597 aaKnown RBP15.47■□□□□ 0.07
SCAF4-201ENST00000286835 KCNG4Q8TDN1 519 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 DDX41Q9UJV9 622 aaKnown RBP15.47■□□□□ 0.07
SCAF4-201ENST00000286835 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
SCAF4-201ENST00000286835 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 LMTK3Q96Q04 1460 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 CTIFO43310 598 aaKnown RBP15.47■□□□□ 0.07
SCAF4-201ENST00000286835 CASQ1P31415 396 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 FANCCQ00597 558 aa15.47■□□□□ 0.07
SCAF4-201ENST00000286835 ATP5JP18859 108 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 ZNF790Q6PG37 636 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 RASSF8Q8NHQ8 419 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 KIAA1468Q9P260 1216 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 HOOK1Q9UJC3 728 aaKnown RBP15.46■□□□□ 0.07
SCAF4-201ENST00000286835 KBTBD3Q8NAB2 608 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 NUP133Q8WUM0 1156 aa15.46■□□□□ 0.07
SCAF4-201ENST00000286835 CEP170BQ9Y4F5 1589 aaPredicted RBP15.46■□□□□ 0.06
SCAF4-201ENST00000286835 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.06
SCAF4-201ENST00000286835 ZNF496Q96IT1 587 aaPredicted RBP15.46■□□□□ 0.06
SCAF4-201ENST00000286835 ALG1Q9BT22 464 aa15.46■□□□□ 0.06
SCAF4-201ENST00000286835 CNNM1Q9NRU3 951 aa15.46■□□□□ 0.06
SCAF4-201ENST00000286835 CALCOCO1Q9P1Z2 691 aa15.46■□□□□ 0.06
SCAF4-201ENST00000286835 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
SCAF4-201ENST00000286835 PFKFB2O60825 505 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 IGKV5-2P06315 115 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 IQCB1Q15051 598 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 SNRPA1P09661 255 aaKnown RBP15.45■□□□□ 0.06
SCAF4-201ENST00000286835 ATP1A3P13637 1013 aa15.45■□□□□ 0.06
SCAF4-201ENST00000286835 AKAP17AQ02040 695 aaKnown RBP15.45■□□□□ 0.06
SCAF4-201ENST00000286835 METTL22Q9BUU2 404 aaPredicted RBP15.45■□□□□ 0.06
SCAF4-201ENST00000286835 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
SCAF4-201ENST00000286835 CCDC12Q8WUD4 166 aaPredicted RBP15.44■□□□□ 0.06
SCAF4-201ENST00000286835 PPP1R13BQ96KQ4 1090 aa15.44■□□□□ 0.06
SCAF4-201ENST00000286835 IL2RBP14784 551 aa15.44■□□□□ 0.06
SCAF4-201ENST00000286835 EVCP57679 992 aa15.44■□□□□ 0.06
SCAF4-201ENST00000286835 LLPHQ9BRT6 129 aaKnown RBP15.44■□□□□ 0.06
SCAF4-201ENST00000286835 DLC1Q96QB1 1528 aa15.44■□□□□ 0.06
SCAF4-201ENST00000286835 SEC31AO94979 1220 aaKnown RBP15.44■□□□□ 0.06
SCAF4-201ENST00000286835 PDIA3P30101 505 aaKnown RBP15.44■□□□□ 0.06
SCAF4-201ENST00000286835 MTX1Q13505 466 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 MCM6Q14566 821 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 GOLGA6L1Q8N7Z2 621 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 PHKBQ93100 1093 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 EPC1Q9H2F5 836 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-201ENST00000286835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■□□□□ 11.2
SCAF4-201ENST00000286835 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
SCAF4-201ENST00000286835 LMAN1P49257 510 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCAF4-201ENST00000286835 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 TPM1P09493 284 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 PNOCQ13519 176 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 PPFIBP1Q86W92 1011 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 NCOA7Q8NI08 942 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 MYL10Q9BUA6 226 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 RNF113AO15541 343 aaKnown RBP15.43■□□□□ 0.06
SCAF4-201ENST00000286835 ADALQ6DHV7 355 aa15.43■□□□□ 0.06
SCAF4-201ENST00000286835 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 TERF2Q15554 542 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 ANO1Q5XXA6 986 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 CCDC102BQ68D86 513 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 SLC26A6Q9BXS9 759 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 PFKFB1P16118 471 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
SCAF4-201ENST00000286835 NEK11Q8NG66 645 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
SCAF4-201ENST00000286835 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
SCAF4-201ENST00000286835 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 CDC25BP30305 580 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 HSP90B2PQ58FF3 399 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 CLIC6Q96NY7 704 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 STX17P56962 302 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
SCAF4-201ENST00000286835 KIF4BQ2VIQ3 1234 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 METTL24Q5JXM2 366 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 TRMT44Q8IYL2 757 aaKnown RBP15.41■□□□□ 0.06
SCAF4-201ENST00000286835 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
SCAF4-201ENST00000286835 CCZ1BP86790 482 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 CCZ1P86791 482 aaPredicted RBP15.41■□□□□ 0.06
SCAF4-201ENST00000286835 LRRC24Q50LG9 513 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 DESI2Q9BSY9 194 aa15.41■□□□□ 0.06
SCAF4-201ENST00000286835 GOLGA8AA7E2F4 631 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ADKP55263 362 aaKnown RBP15.4■□□□□ 0.06
SCAF4-201ENST00000286835 MYL5Q02045 173 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 HAUS7Q99871 368 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms