RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 CST9Q5W186 159 aa11.66□□□□□ -0.54
CRIP3-201ENST00000274990 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
CRIP3-201ENST00000274990 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
CRIP3-201ENST00000274990 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
CRIP3-201ENST00000274990 TDRD7Q8NHU6 1098 aaKnown RBP11.66□□□□□ -0.54
CRIP3-201ENST00000274990 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
CRIP3-201ENST00000274990 COL1A1P02452 1464 aaPredicted RBP11.65□□□□□ -0.54
CRIP3-201ENST00000274990 PUM3Q15397 648 aaKnown RBP11.65□□□□□ -0.54
CRIP3-201ENST00000274990 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
CRIP3-201ENST00000274990 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
CRIP3-201ENST00000274990 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
CRIP3-201ENST00000274990 SLC5A1P13866 664 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 PHKA1P46020 1223 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 ATP2B3Q16720 1220 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 KLRG1Q96E93 195 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 CEP126Q9P2H0 1117 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 ABT1Q9ULW3 272 aaKnown RBP11.64□□□□□ -0.55
CRIP3-201ENST00000274990 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
CRIP3-201ENST00000274990 WNT10BO00744 389 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 CIAO1O76071 339 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 ATP8B2P98198 1209 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 MTX1Q13505 466 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 MVPQ14764 893 aaKnown RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 LPIN2Q92539 896 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 DCPSQ96C86 337 aaKnown RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
CRIP3-201ENST00000274990 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
CRIP3-201ENST00000274990 A0A1B0GUL7 405 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 APBB1O00213 710 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 SURF6O75683 361 aaKnown RBP11.62□□□□□ -0.55
CRIP3-201ENST00000274990 RBM5P52756 815 aaKnown RBP eCLIP11.62□□□□□ -0.55
CRIP3-201ENST00000274990 POLA2Q14181 598 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 CFAP100Q494V2 611 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 CEP85Q6P2H3 762 aa11.62□□□□□ -0.55
CRIP3-201ENST00000274990 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
CRIP3-201ENST00000274990 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
CRIP3-201ENST00000274990 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
CRIP3-201ENST00000274990 FAM205AQ6ZU69 1335 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 ARAP2Q8WZ64 1704 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 VEGFBP49765 207 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 G3BP1Q13283 466 aaKnown RBP eCLIP11.61□□□□□ -0.55
CRIP3-201ENST00000274990 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
CRIP3-201ENST00000274990 PRKG1Q13976 671 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 CYP4F22Q6NT55 531 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
CRIP3-201ENST00000274990 CDCA5Q96FF9 252 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 XAGE2Q96GT9 111 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 HDAC5Q9UQL6 1122 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
CRIP3-201ENST00000274990 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 ZNF609O15014 1411 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 CACNB3P54284 484 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 DLGAP5Q15398 846 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
CRIP3-201ENST00000274990 TLR7Q9NYK1 1049 aaKnown RBP11.6□□□□□ -0.55
CRIP3-201ENST00000274990 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
CRIP3-201ENST00000274990 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 AOC2O75106 756 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 CDAN1Q8IWY9 1227 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
CRIP3-201ENST00000274990 TDRD3Q9H7E2 651 aaKnown RBP11.59□□□□□ -0.55
CRIP3-201ENST00000274990 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
CRIP3-201ENST00000274990 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 PRDX5P30044 214 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 CRKP46108 304 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 RASGRF1Q13972 1273 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 DIXDC1Q155Q3 683 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 DEFB115Q30KQ5 88 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 IL1RAPL2Q9NP60 686 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 PCNTO95613 3336 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
CRIP3-201ENST00000274990 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
CRIP3-201ENST00000274990 TCP10L2B9ZVM9 353 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms