RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 AKAP2Q9Y2D5 859 aa22.38■■□□□ 1.17
CPNE7-201ENST00000268720 HMGB1P09429 215 aaKnown RBP22.37■■□□□ 1.17
CPNE7-201ENST00000268720 PDIA4P13667 645 aaKnown RBP22.37■■□□□ 1.17
CPNE7-201ENST00000268720 NSUN7Q8NE18 718 aaKnown RBP22.37■■□□□ 1.17
CPNE7-201ENST00000268720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.37■■□□□ 1.17
CPNE7-201ENST00000268720 C16orf45Q96MC5 204 aaPredicted RBP22.37■■□□□ 1.17
CPNE7-201ENST00000268720 RIPOR2Q9Y4F9 1068 aa22.37■■□□□ 1.17
CPNE7-201ENST00000268720 ELP1O95163 1332 aa22.37■■□□□ 1.17
CPNE7-201ENST00000268720 ISM2Q6H9L7 571 aa22.37■■□□□ 1.17
CPNE7-201ENST00000268720 SMARCC2Q8TAQ2 1214 aa22.37■■□□□ 1.17
CPNE7-201ENST00000268720 BCL9O00512 1426 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 ITGB4P16144 1822 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 NHSL1Q5SYE7 1610 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 AGXT2Q9BYV1 514 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 RIC1Q4ADV7 1423 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 SNAP23O00161 211 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 METTL24Q5JXM2 366 aa22.36■■□□□ 1.17
CPNE7-201ENST00000268720 SCAND2PQ9GZW5 306 aaPredicted RBP22.36■■□□□ 1.17
CPNE7-201ENST00000268720 ZNF165P49910 485 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 CCDC144BQ3MJ40 725 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 CCDC144CPQ8IYA2 1237 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 PRIMPOLQ96LW4 560 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 MCAMP43121 646 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 NAA30Q147X3 362 aaPredicted RBP22.35■■□□□ 1.17
CPNE7-201ENST00000268720 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
CPNE7-201ENST00000268720 FGAP02671 866 aa22.34■■□□□ 1.17
CPNE7-201ENST00000268720 PTPN21Q16825 1174 aa22.34■■□□□ 1.17
CPNE7-201ENST00000268720 INCENPQ9NQS7 918 aa22.34■■□□□ 1.17
CPNE7-201ENST00000268720 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
CPNE7-201ENST00000268720 IRS4O14654 1257 aaPredicted RBP22.34■■□□□ 1.17
CPNE7-201ENST00000268720 CCAR1Q8IX12 1150 aaKnown RBP22.34■■□□□ 1.17
CPNE7-201ENST00000268720 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
CPNE7-201ENST00000268720 PDIA3P30101 505 aaKnown RBP22.34■■□□□ 1.17
CPNE7-201ENST00000268720 CTSWP56202 376 aa22.34■■□□□ 1.17
CPNE7-201ENST00000268720 DISP2A7MBM2 1401 aa22.33■■□□□ 1.17
CPNE7-201ENST00000268720 ME1P48163 572 aa22.33■■□□□ 1.17
CPNE7-201ENST00000268720 BIN1O00499 593 aa22.33■■□□□ 1.16
CPNE7-201ENST00000268720 HMGN5P82970 282 aaKnown RBP22.33■■□□□ 1.16
CPNE7-201ENST00000268720 AIFM3Q96NN9 605 aa22.33■■□□□ 1.16
CPNE7-201ENST00000268720 CLSTN2Q9H4D0 955 aa22.33■■□□□ 1.16
CPNE7-201ENST00000268720 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.16
CPNE7-201ENST00000268720 UBN2Q6ZU65 1347 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 CDHR2Q9BYE9 1310 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 A0A1B0GVL5 298 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 UBE2Q2LH0YL09 131 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 ILDR1Q86SU0 546 aaPredicted RBP22.32■■□□□ 1.16
CPNE7-201ENST00000268720 KIF3AQ9Y496 699 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 EXOC5O00471 708 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 RIOK3O14730 519 aaKnown RBP22.32■■□□□ 1.16
CPNE7-201ENST00000268720 ZNF592Q92610 1267 aa22.32■■□□□ 1.16
CPNE7-201ENST00000268720 ADD1P35611 737 aaKnown RBP22.31■■□□□ 1.16
CPNE7-201ENST00000268720 TICAM2Q86XR7 235 aa22.31■■□□□ 1.16
CPNE7-201ENST00000268720 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
CPNE7-201ENST00000268720 FILIP1Q7Z7B0 1213 aa22.31■■□□□ 1.16
CPNE7-201ENST00000268720 VGLL2Q8N8G2 317 aa22.31■■□□□ 1.16
CPNE7-201ENST00000268720 HELBQ8NG08 1087 aaPredicted RBP22.31■■□□□ 1.16
CPNE7-201ENST00000268720 LLPHQ9BRT6 129 aaKnown RBP22.31■■□□□ 1.16
CPNE7-201ENST00000268720 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 SPEF2Q9C093 1822 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
CPNE7-201ENST00000268720 APPBP2Q92624 585 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 GOLGA6L6A8MZA4 724 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 GPAA1O43292 621 aa22.3■■□□□ 1.16
CPNE7-201ENST00000268720 MTERF4Q7Z6M4 381 aaKnown RBP22.29■■□□□ 1.16
CPNE7-201ENST00000268720 SALL1Q9NSC2 1324 aa22.29■■□□□ 1.16
CPNE7-201ENST00000268720 SPDYE4A6NLX3 237 aa22.29■■□□□ 1.16
CPNE7-201ENST00000268720 ZFYP08048 801 aaPredicted RBP22.29■■□□□ 1.16
CPNE7-201ENST00000268720 IMMTQ16891 758 aaKnown RBP22.28■■□□□ 1.16
CPNE7-201ENST00000268720 CACTINQ8WUQ7 758 aaKnown RBP22.28■■□□□ 1.16
CPNE7-201ENST00000268720 CLIP2Q9UDT6 1046 aa22.28■■□□□ 1.16
CPNE7-201ENST00000268720 LRP6O75581 1613 aa22.28■■□□□ 1.16
CPNE7-201ENST00000268720 USP27XA6NNY8 438 aa22.28■■□□□ 1.16
CPNE7-201ENST00000268720 FDPSP14324 419 aaKnown RBP22.28■■□□□ 1.16
CPNE7-201ENST00000268720 FSIP1Q8NA03 581 aa22.28■■□□□ 1.16
CPNE7-201ENST00000268720 ZNF274Q96GC6 653 aaPredicted RBP22.28■■□□□ 1.16
CPNE7-201ENST00000268720 ZSCAN16Q9H4T2 348 aaPredicted RBP22.28■■□□□ 1.16
CPNE7-201ENST00000268720 SENP2Q9HC62 589 aa22.28■■□□□ 1.16
CPNE7-201ENST00000268720 GTF2F1P35269 517 aaKnown RBP eCLIP22.27■■□□□ 1.164e-7■■■■□ 22.1
CPNE7-201ENST00000268720 PHKA1P46020 1223 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 ZNF75DP51815 510 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 SLC9C2Q5TAH2 1124 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 MYL10Q9BUA6 226 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 CLIC4Q9Y696 253 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 PDE8BO95263 885 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 CBX1P83916 185 aa22.27■■□□□ 1.16
CPNE7-201ENST00000268720 LRRFIP1Q32MZ4 808 aaKnown RBP22.27■■□□□ 1.16
CPNE7-201ENST00000268720 CCDC94Q9BW85 323 aaPredicted RBP22.27■■□□□ 1.16
CPNE7-201ENST00000268720 PIH1D3Q9NQM4 214 aaKnown RBP22.27■■□□□ 1.16
CPNE7-201ENST00000268720 DDX19AQ9NUU7 478 aaKnown RBP22.27■■□□□ 1.16
CPNE7-201ENST00000268720 TRMT1Q9NXH9 659 aaKnown RBP22.27■■□□□ 1.16
CPNE7-201ENST00000268720 ANTXR2P58335 489 aa22.26■■□□□ 1.15
CPNE7-201ENST00000268720 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.26■■□□□ 1.15
CPNE7-201ENST00000268720 CTNNA3Q9UI47 895 aa22.26■■□□□ 1.15
CPNE7-201ENST00000268720 V9GYY5 206 aaPredicted RBP22.26■■□□□ 1.15
CPNE7-201ENST00000268720 AKAP11Q9UKA4 1901 aa22.26■■□□□ 1.15
CPNE7-201ENST00000268720 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
CPNE7-201ENST00000268720 NAA16Q6N069 864 aaPredicted RBP22.26■■□□□ 1.15
CPNE7-201ENST00000268720 SLIT2O94813 1529 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms