RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 ZNF569Q5MCW4 686 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 CASC4Q6P4E1 433 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 NAIPQ13075 1403 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 GSTO1P78417 241 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 BSPRYQ5W0U4 402 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
CUL3-201ENST00000264414 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
CUL3-201ENST00000264414 ZBTB43O43298 467 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 SH2D4BQ5SQS7 431 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 STMN4Q9H169 189 aaPredicted RBP16.68■□□□□ 0.26
CUL3-201ENST00000264414 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
CUL3-201ENST00000264414 SETDB1Q15047 1291 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 OPA1O60313 960 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 BRF1Q92994 677 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 WDR46O15213 610 aaKnown RBP16.68■□□□□ 0.26
CUL3-201ENST00000264414 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 NUF2Q9BZD4 464 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 TRIM31Q9BZY9 425 aa16.68■□□□□ 0.26
CUL3-201ENST00000264414 GIPC1O14908 333 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 ITIH3Q06033 890 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 ARHGEF2Q92974 986 aaKnown RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 TTC14Q96N46 770 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 SAMD15Q9P1V8 674 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 SYT1P21579 422 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 IFRD2Q12894 506 aaPredicted RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 SETDB2Q96T68 719 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 BZW2Q9Y6E2 419 aaKnown RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 LMOD1P29536 600 aaPredicted RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 DNAJC25Q9H1X3 360 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 CASQ2O14958 399 aaPredicted RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
CUL3-201ENST00000264414 SKILP12757 684 aa16.67■□□□□ 0.26
CUL3-201ENST00000264414 SPATA17Q96L03 361 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 MCM5P33992 734 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 C10orf67Q8IYJ2 551 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 CHMP6Q96FZ7 201 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 FNBP1Q96RU3 617 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
CUL3-201ENST00000264414 NEDD9Q14511 834 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 ALDH3A1P30838 453 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 PRPHP41219 470 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 Q6ZUG5 572 aa16.66■□□□□ 0.26
CUL3-201ENST00000264414 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.263e-10■■■■■ 43.4
CUL3-201ENST00000264414 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
CUL3-201ENST00000264414 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
CUL3-201ENST00000264414 CLUL1Q15846 466 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 PSMA7O14818 248 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 PCK1P35558 622 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 MSANTD4Q8NCY6 345 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 CCDC42Q96M95 316 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 LMBR1Q8WVP7 490 aa16.65■□□□□ 0.26
CUL3-201ENST00000264414 IL1RL1Q01638 556 aa16.64■□□□□ 0.26
CUL3-201ENST00000264414 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.26
CUL3-201ENST00000264414 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.26
CUL3-201ENST00000264414 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
CUL3-201ENST00000264414 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 C8orf37Q96NL8 207 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 SPOPO43791 374 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 KRT19P08727 400 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 PRR16Q569H4 304 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 NEMFO60524 1076 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 BAG1Q99933 345 aaPredicted RBP16.64■□□□□ 0.25
CUL3-201ENST00000264414 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
CUL3-201ENST00000264414 LCA5Q86VQ0 697 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 NSD3Q9BZ95 1437 aa16.64■□□□□ 0.25
CUL3-201ENST00000264414 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.63■□□□□ 0.25
CUL3-201ENST00000264414 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 TTC30BQ8N4P2 665 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 STX10O60499 249 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 PPFIBP2Q8ND30 876 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 PYM1Q9BRP8 204 aaKnown RBP16.63■□□□□ 0.25
CUL3-201ENST00000264414 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
CUL3-201ENST00000264414 RNF169Q8NCN4 708 aa16.62■□□□□ 0.25
CUL3-201ENST00000264414 MTRF1LQ9UGC7 380 aaKnown RBP16.62■□□□□ 0.25
CUL3-201ENST00000264414 CTNND2Q9UQB3 1225 aa16.62■□□□□ 0.25
CUL3-201ENST00000264414 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms