RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RUFY3Q7L099 469 aa7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 HMG20BQ9P0W2 317 aa7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 COL4A4P53420 1690 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 ASTN1O14525 1302 aa7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 M0R2N6 131 aa7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 HIRAP54198 1017 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 FMR1Q06787 632 aaKnown RBP eCLIP7.2□□□□□ -1.26
TOPBP1-201ENST00000260810 MAST3O60307 1309 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 TNNI3KQ59H18 835 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 IL17RBQ9NRM6 502 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 FPGT-TNNI3KV9GXZ4 949 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 SOCS7O14512 581 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 KRT27Q7Z3Y8 459 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 LARP6Q9BRS8 491 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 CCDC87Q9NVE4 849 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 PDCD11Q14690 1871 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 SGSM2O43147 1006 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 PRKAB2O43741 272 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 IGHA2P01877 340 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 CANXP27824 592 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 CTSWP56202 376 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 EVCP57679 992 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 MYH16Q9H6N6 1097 aa7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 TRIP12Q14669 1992 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-201ENST00000260810 CHRNA5P30532 468 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 CALD1Q05682 793 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 MOGSQ13724 837 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 NGLY1Q96IV0 654 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 TELO2Q9Y4R8 837 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 TBC1D10CQ8IV04 446 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 MAP4K1Q92918 833 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 RTFDC1Q9BY42 306 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 ZNF236Q9UL36 1845 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 NLRC5Q86WI3 1866 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 BCAMP50895 628 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 RBM6P78332 1123 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 NID2Q14112 1375 aa7.18□□□□□ -1.26
TOPBP1-201ENST00000260810 HSD3B7Q9H2F3 369 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 EXOC5O00471 708 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 PRDX5P30044 214 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 DGKZQ13574 1117 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 CCDC191Q8NCU4 936 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 CCDC8Q9H0W5 538 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 TRPC5Q9UL62 973 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 GABPAQ06546 454 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 CABP4P57796 275 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 MYT1Q01538 1121 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 HAUS7Q99871 368 aa7.17□□□□□ -1.26
TOPBP1-201ENST00000260810 CYP2D7A0A087X1C5 515 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 FKBP5Q13451 457 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 CYB5R4Q7L1T6 521 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 HYPKQ9NX55 129 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 SPG7Q9UQ90 795 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 A0A087WZG4 1122 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 METTL16Q86W50 562 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 ITPRIPQ8IWB1 547 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 GSG1L2A8MUP6 293 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 GPSM2P81274 684 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 ECM1Q16610 540 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 GAS2L3Q86XJ1 694 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 CFAP53Q96M91 514 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 BRPF3Q9ULD4 1205 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 ZBTB7CA1YPR0 619 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
TOPBP1-201ENST00000260810 HSPA4P34932 840 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 RAPGEF4Q8WZA2 1011 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 PDE8BO95263 885 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 NEFLP07196 543 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 ITGA6P23229 1130 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 PCDH10Q9P2E7 1040 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 FZD1Q9UP38 647 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 AKAP13Q12802 2813 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 SRGAP3O43295 1099 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 CYTH3O43739 400 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 TAL1P17542 331 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 CCDC30Q5VVM6 783 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 BCAS3Q9H6U6 928 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 PODXL2Q9NZ53 605 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 SNX14Q9Y5W7 946 aa7.15□□□□□ -1.26
TOPBP1-201ENST00000260810 RANBP6O60518 1105 aaKnown RBP7.15□□□□□ -1.27
TOPBP1-201ENST00000260810 ZAP70P43403 619 aa7.15□□□□□ -1.27
TOPBP1-201ENST00000260810 PPP1R11O60927 126 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 DZIP3Q86Y13 1208 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 A0A1B0GUL7 405 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 CUL4AQ13619 759 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 SEC23AQ15436 765 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 SLC15A2Q16348 729 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 CLEC17AQ6ZS10 378 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 DDX19BQ9UMR2 479 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 NOTCH4Q99466 2003 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 POTEJP0CG39 1038 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 GYG1P46976 350 aa7.14□□□□□ -1.27
TOPBP1-201ENST00000260810 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms