RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 SPTLC2O15270 562 aa16.6■□□□□ 0.25
FGFR3-201ENST00000260795 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
FGFR3-201ENST00000260795 XAGE2Q96GT9 111 aa16.6■□□□□ 0.25
FGFR3-201ENST00000260795 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
FGFR3-201ENST00000260795 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
FGFR3-201ENST00000260795 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 USP21Q9UK80 565 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
FGFR3-201ENST00000260795 POLR3GO15318 223 aaPredicted RBP16.59■□□□□ 0.25
FGFR3-201ENST00000260795 RNF113AO15541 343 aaKnown RBP16.59■□□□□ 0.25
FGFR3-201ENST00000260795 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
FGFR3-201ENST00000260795 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 SMIM5Q71RC9 77 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.25
FGFR3-201ENST00000260795 SYNE4Q8N205 404 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.25
FGFR3-201ENST00000260795 CCP110O43303 1012 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
FGFR3-201ENST00000260795 DNAI1Q9UI46 699 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 SPATA31D1Q6ZQQ2 1576 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 PRDM1O75626 825 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
FGFR3-201ENST00000260795 UBASH3AP57075 661 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.24
FGFR3-201ENST00000260795 IL25Q9H293 177 aa16.58■□□□□ 0.24
FGFR3-201ENST00000260795 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 SNAP23O00161 211 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 ZAP70P43403 619 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 HSP90B2PQ58FF3 399 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
FGFR3-201ENST00000260795 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 PYCARDQ9ULZ3 195 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 CAVIN2O95810 425 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
FGFR3-201ENST00000260795 TCIRG1Q13488 830 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 KBTBD3Q8NAB2 608 aa16.57■□□□□ 0.24
FGFR3-201ENST00000260795 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.245e-13■□□□□ 8.9
FGFR3-201ENST00000260795 ZBTB43O43298 467 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 U2AF2P26368 475 aaKnown RBP eCLIP16.56■□□□□ 0.24
FGFR3-201ENST00000260795 GSDMDP57764 484 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 MYRIPQ8NFW9 859 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 DBNLQ9UJU6 430 aaKnown RBP16.56■□□□□ 0.24
FGFR3-201ENST00000260795 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
FGFR3-201ENST00000260795 CAGE1Q8TC20 777 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
FGFR3-201ENST00000260795 NEMFO60524 1076 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 SASH1O94885 1247 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
FGFR3-201ENST00000260795 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
FGFR3-201ENST00000260795 TMCO3Q6UWJ1 677 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 CCDC87Q9NVE4 849 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 DACH1Q9UI36 760 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 PICALMQ13492 652 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 PIGBQ92521 554 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 AFMP43652 599 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 ZNF75DP51815 510 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 PAXBP1Q9Y5B6 917 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 TXLNAP40222 546 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 GNG11P61952 73 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
FGFR3-201ENST00000260795 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
FGFR3-201ENST00000260795 WASF1Q92558 559 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 MBD4O95243 580 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
FGFR3-201ENST00000260795 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 SYT10Q6XYQ8 523 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 GTF3C6Q969F1 213 aa16.54■□□□□ 0.24
FGFR3-201ENST00000260795 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
FGFR3-201ENST00000260795 CYP2E1P05181 493 aaPredicted RBP16.53■□□□□ 0.24
FGFR3-201ENST00000260795 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
FGFR3-201ENST00000260795 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
FGFR3-201ENST00000260795 CARD10Q9BWT7 1032 aa16.53■□□□□ 0.24
FGFR3-201ENST00000260795 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
FGFR3-201ENST00000260795 KIF2AO00139 706 aaPredicted RBP16.53■□□□□ 0.24
FGFR3-201ENST00000260795 ATP5JP18859 108 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms