RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CPLX1O14810 134 aa19.71■□□□□ 0.75
SSPN-201ENST00000242729 ITGA6P23229 1130 aa19.71■□□□□ 0.75
SSPN-201ENST00000242729 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
SSPN-201ENST00000242729 KIF6Q6ZMV9 814 aa19.71■□□□□ 0.75
SSPN-201ENST00000242729 SPTLC3Q9NUV7 552 aa19.71■□□□□ 0.75
SSPN-201ENST00000242729 ORC3Q9UBD5 711 aaPredicted RBP19.71■□□□□ 0.75
SSPN-201ENST00000242729 MARCKSP29966 332 aaPredicted RBP19.7■□□□□ 0.74
SSPN-201ENST00000242729 ANTXR2P58335 489 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 ATP2B3Q16720 1220 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 RCOR1Q9UKL0 485 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 NDUFA8P51970 172 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 HMGN5P82970 282 aaKnown RBP19.7■□□□□ 0.74
SSPN-201ENST00000242729 NAA16Q6N069 864 aaPredicted RBP19.7■□□□□ 0.74
SSPN-201ENST00000242729 ZSCAN25Q6NSZ9 544 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 RALYLQ86SE5 291 aaKnown RBP19.7■□□□□ 0.74
SSPN-201ENST00000242729 PHKBQ93100 1093 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 C8orf76Q96K31 380 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
SSPN-201ENST00000242729 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
SSPN-201ENST00000242729 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
SSPN-201ENST00000242729 AOPEPQ8N6M6 819 aa19.69■□□□□ 0.74
SSPN-201ENST00000242729 ZNF213O14771 459 aa19.69■□□□□ 0.74
SSPN-201ENST00000242729 STK38Q15208 465 aa19.69■□□□□ 0.74
SSPN-201ENST00000242729 RBM43Q6ZSC3 357 aaKnown RBP19.69■□□□□ 0.74
SSPN-201ENST00000242729 STRCP1A6NGW2 1772 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 PTPN21Q16825 1174 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 GPR108Q9NPR9 543 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 HPS5Q9UPZ3 1129 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 NAA30Q147X3 362 aaPredicted RBP19.68■□□□□ 0.74
SSPN-201ENST00000242729 CCDC82Q8N4S0 544 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 TDRD7Q8NHU6 1098 aaKnown RBP19.68■□□□□ 0.74
SSPN-201ENST00000242729 LAMA4Q16363 1823 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 GLI3P10071 1580 aa19.68■□□□□ 0.74
SSPN-201ENST00000242729 IQCB1Q15051 598 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 ZMYND15Q9H091 742 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 PIH1D3Q9NQM4 214 aaKnown RBP19.67■□□□□ 0.74
SSPN-201ENST00000242729 TRMT1Q9NXH9 659 aaKnown RBP19.67■□□□□ 0.74
SSPN-201ENST00000242729 TRMT112Q9UI30 125 aaKnown RBP19.67■□□□□ 0.74
SSPN-201ENST00000242729 SALL1Q9NSC2 1324 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 USP27XA6NNY8 438 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 PDIA4P13667 645 aaKnown RBP19.67■□□□□ 0.74
SSPN-201ENST00000242729 PHKA1P46020 1223 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 ZNF396Q96N95 335 aaPredicted RBP19.67■□□□□ 0.74
SSPN-201ENST00000242729 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 KIF3AQ9Y496 699 aa19.67■□□□□ 0.74
SSPN-201ENST00000242729 B4E1Z4 1266 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 CIAO1O76071 339 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 TBC1D10CQ8IV04 446 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 ZNF274Q96GC6 653 aaPredicted RBP19.66■□□□□ 0.74
SSPN-201ENST00000242729 AGXT2Q9BYV1 514 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 ATG3Q9NT62 314 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 NBPF3Q9H094 633 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 WWC3Q9ULE0 1092 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 AKAP2Q9Y2D5 859 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 FAM160A1Q05DH4 1040 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 BTG4Q9NY30 223 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 IQSEC3Q9UPP2 1182 aaPredicted RBP19.66■□□□□ 0.74
SSPN-201ENST00000242729 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
SSPN-201ENST00000242729 STX1AQ16623 288 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 ZBTB38Q8NAP3 1195 aaPredicted RBP19.65■□□□□ 0.74
SSPN-201ENST00000242729 APPBP2Q92624 585 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 SLC4A9Q96Q91 983 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 KCPQ6ZWJ8 1503 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
SSPN-201ENST00000242729 CHAF1AQ13111 956 aaPredicted RBP19.65■□□□□ 0.74
SSPN-201ENST00000242729 DPCR1Q3MIW9 517 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 MB21D2Q8IYB1 491 aaPredicted RBP19.65■□□□□ 0.74
SSPN-201ENST00000242729 ENGASEQ8NFI3 743 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 NCOA7Q8NI08 942 aa19.65■□□□□ 0.74
SSPN-201ENST00000242729 CPDO75976 1380 aa19.64■□□□□ 0.74
SSPN-201ENST00000242729 TPD52L1Q16890 204 aaPredicted RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 DHX40Q8IX18 779 aaKnown RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 PRIMPOLQ96LW4 560 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 ZKSCAN3Q9BRR0 538 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 CARD10Q9BWT7 1032 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 TOMM22Q9NS69 142 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 ZNF335Q9H4Z2 1342 aaPredicted RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 RRP12Q5JTH9 1297 aaKnown RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 NLRP10Q86W26 655 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 CMTR1Q8N1G2 835 aaKnown RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 MRPS27Q92552 414 aaKnown RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 CTNNA3Q9UI47 895 aa19.64■□□□□ 0.73
SSPN-201ENST00000242729 COL5A2P05997 1499 aaPredicted RBP19.64■□□□□ 0.73
SSPN-201ENST00000242729 ZNF532Q9HCE3 1301 aa19.63■□□□□ 0.73
SSPN-201ENST00000242729 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
SSPN-201ENST00000242729 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
SSPN-201ENST00000242729 CTDSPL2Q05D32 466 aa19.63■□□□□ 0.73
SSPN-201ENST00000242729 RIPOR2Q9Y4F9 1068 aa19.63■□□□□ 0.73
SSPN-201ENST00000242729 TNNT1P13805 278 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 HSP90AA4PQ58FG1 418 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 SPECC1Q5M775 1068 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 NFXL1Q6ZNB6 911 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 LINC00301Q8NCQ3 95 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms