RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KIAA0825Q8IV33 1275 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 TTF2Q9UNY4 1162 aaKnown RBP13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
TNFAIP3-201ENST00000237289 SDSP20132 328 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 NUP98P52948 1817 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 PSMD1Q99460 953 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 HAUS7Q99871 368 aa13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP3-201ENST00000237289 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 PLCG2P16885 1265 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 PDE4AP27815 886 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 TDO2P48775 406 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 RASSF7Q02833 373 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 RASGRF1Q13972 1273 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 C10orf71Q711Q0 1435 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 KBTBD3Q8NAB2 608 aa13.35□□□□□ -0.27
TNFAIP3-201ENST00000237289 SLC3A2P08195 630 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 DLGAP5Q15398 846 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 TRDNQ13061 729 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 VEZTQ9HBM0 779 aa13.34□□□□□ -0.27
TNFAIP3-201ENST00000237289 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.27
TNFAIP3-201ENST00000237289 MED23Q9ULK4 1368 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 MYO3BQ8WXR4 1341 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 POLR3DP05423 398 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 MCAMP43121 646 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 SCNN1DP51172 638 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 ISY1Q9ULR0 285 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
TNFAIP3-201ENST00000237289 FGFR2P21802 821 aa13.32□□□□□ -0.28
TNFAIP3-201ENST00000237289 KLRK1P26718 216 aa13.32□□□□□ -0.28
TNFAIP3-201ENST00000237289 ANP32AP39687 249 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-201ENST00000237289 NAPBQ9H115 298 aa13.32□□□□□ -0.28
TNFAIP3-201ENST00000237289 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
TNFAIP3-201ENST00000237289 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 RGPD3A6NKT7 1758 aaPredicted RBP13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 RGPD4Q7Z3J3 1758 aa13.31□□□□□ -0.28
TNFAIP3-201ENST00000237289 TNNI2P48788 182 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 PICALMQ13492 652 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 VGLL2Q8N8G2 317 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 APPBP2Q92624 585 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 SCN7AQ01118 1682 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZNF609O15014 1411 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 TEX11Q8IYF3 940 aa13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNFAIP3-201ENST00000237289 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 HLA-DOAP06340 250 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 PDE6AP16499 860 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 GNAT2P19087 354 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 PSMD14O00487 310 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 MBD4O95243 580 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
TNFAIP3-201ENST00000237289 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 KCNA3P22001 575 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 NUP188Q5SRE5 1749 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms