RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 LRCH2Q5VUJ6 765 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 AK2P54819 239 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 DDX23Q9BUQ8 820 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 EFCAB8A8MWE9 144 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 WTAPQ15007 396 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 PPP2R5EQ16537 467 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 FERMT2Q96AC1 680 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 ZGPATQ8N5A5 531 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 CWC25Q9NXE8 425 aaPredicted RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 DHX32Q7L7V1 743 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 CCDC51Q96ER9 411 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 F6X3S4 739 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 CASQ2O14958 399 aaPredicted RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 SYCP3Q8IZU3 236 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 MLKLQ8NB16 471 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 CABS1Q96KC9 395 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 BICDL1Q6ZP65 573 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 NUP58Q9BVL2 599 aa9.26□□□□□ -0.93
APOB-201ENST00000233242 PCF11O94913 1555 aaKnown RBP9.26□□□□□ -0.93
APOB-201ENST00000233242 RTL9Q8NET4 1388 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 CALM1P0DP23 149 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 CALM2P0DP24 149 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 CALM3P0DP25 149 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 MAP7D1Q3KQU3 841 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 AP1ARQ63HQ0 302 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ISM2Q6H9L7 571 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 CCDC62Q6P9F0 684 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 FAM71BQ8TC56 605 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 VIMP08670 466 aaKnown RBP9.25□□□□□ -0.93
APOB-201ENST00000233242 MARCKSP29966 332 aaPredicted RBP9.25□□□□□ -0.93
APOB-201ENST00000233242 ABCF2Q9UG63 623 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 AFMP43652 599 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ZNF365Q70YC5 407 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ESR2Q92731 530 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 UTP11Q9Y3A2 253 aaKnown RBP9.25□□□□□ -0.93
APOB-201ENST00000233242 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ABCC5O15440 1437 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 SPTY2D1Q68D10 685 aaPredicted RBP9.25□□□□□ -0.93
APOB-201ENST00000233242 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ESCO1Q5FWF5 840 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 MCUR1Q96AQ8 359 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 MIS18AQ9NYP9 233 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
APOB-201ENST00000233242 APBA1Q02410 837 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
APOB-201ENST00000233242 CHMLP26374 656 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 UBLCP1Q8WVY7 318 aaPredicted RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 GBP5Q96PP8 586 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 TMOD2Q9NZR1 351 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 CEP85LQ5SZL2 805 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 PHLDB3Q6NSJ2 640 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 CARD6Q9BX69 1037 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 CREB3L3Q68CJ9 461 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 RAB3IPQ96QF0 476 aaPredicted RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 KCNK9Q9NPC2 374 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 EIF2AK4Q9P2K8 1649 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 FCHSD1Q86WN1 690 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 FANCCQ00597 558 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 HPDP32754 393 aaPredicted RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 KAT14Q9H8E8 782 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 RNF10Q8N5U6 811 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 GOLGA8KD6RF30 607 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 MYD88Q99836 296 aa9.24□□□□□ -0.93
APOB-201ENST00000233242 LARSQ9P2J5 1176 aaKnown RBP9.24□□□□□ -0.93
APOB-201ENST00000233242 GNAT2P19087 354 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 RILPL1Q5EBL4 403 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 RAB3IL1Q8TBN0 382 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 BCAP29Q9UHQ4 241 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 GCKP35557 465 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 IRX4P78413 519 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 MMRN2Q9H8L6 949 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 PNMA8AQ86V59 439 aaPredicted RBP9.23□□□□□ -0.93
APOB-201ENST00000233242 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 PUS7Q96PZ0 661 aaKnown RBP9.23□□□□□ -0.93
APOB-201ENST00000233242 RPL13P26373 211 aaKnown RBP9.23□□□□□ -0.93
APOB-201ENST00000233242 CCDC14Q49A88 953 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 RABGGTAQ92696 567 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 PPP1R7Q15435 360 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 GSTA5Q7RTV2 222 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 LDHCP07864 332 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 CFAP221Q4G0U5 840 aa9.23□□□□□ -0.93
APOB-201ENST00000233242 RPUSD2Q8IZ73 545 aaKnown RBP9.23□□□□□ -0.93
APOB-201ENST00000233242 SPATS2LQ9NUQ6 558 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms