RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 CAMTA2O94983 1202 aa7.31□□□□□ -1.24
AFP-201ENST00000226359 TBC1D9BQ66K14 1250 aa7.31□□□□□ -1.24
AFP-201ENST00000226359 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
AFP-201ENST00000226359 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
AFP-201ENST00000226359 C2CD5Q86YS7 1000 aa7.31□□□□□ -1.24
AFP-201ENST00000226359 MAFBQ9Y5Q3 323 aaPredicted RBP7.31□□□□□ -1.24
AFP-201ENST00000226359 SRCAPQ6ZRS2 3230 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 CCER2I3L3R5 266 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 GIGYF1O75420 1035 aaPredicted RBP7.3□□□□□ -1.24
AFP-201ENST00000226359 HOXB7P09629 217 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 MYL6BP14649 208 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 EIF2S2P20042 333 aaKnown RBP7.3□□□□□ -1.24
AFP-201ENST00000226359 GNAI1P63096 354 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 NGEFQ8N5V2 710 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 ZNF516Q92618 1163 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 SPSB2Q99619 263 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
AFP-201ENST00000226359 SCN7AQ01118 1682 aa7.3□□□□□ -1.24
AFP-201ENST00000226359 ERVV-1B6SEH8 477 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 HSP90AB3PQ58FF7 597 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 SOGA3Q5TF21 947 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 DESI1Q6ICB0 168 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 TTLL6Q8N841 843 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 ZNF784Q8NCA9 323 aaPredicted RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 ZNF622Q969S3 477 aaKnown RBP eCLIP7.29□□□□□ -1.24
AFP-201ENST00000226359 BRIP1Q9BX63 1249 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 MAP3K15Q6ZN16 1313 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 MYH14Q7Z406 1995 aaKnown RBP7.29□□□□□ -1.24
AFP-201ENST00000226359 PRAMEF22A3QJZ6 481 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 TPTE2Q6XPS3 522 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 CNKSR1Q969H4 720 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
AFP-201ENST00000226359 LAMB4A4D0S4 1761 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 APAF1O14727 1248 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 CHRNA5P30532 468 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 PARP10Q53GL7 1025 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 PRR5LQ6MZQ0 368 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 LYPD8Q6UX82 237 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 PPP1R42Q7Z4L9 355 aa7.28□□□□□ -1.24
AFP-201ENST00000226359 TMX4Q9H1E5 349 aaPredicted RBP7.28□□□□□ -1.24
AFP-201ENST00000226359 KIAA1522Q9P206 1035 aaPredicted RBP7.28□□□□□ -1.24
AFP-201ENST00000226359 RBM47A0AV96 593 aaKnown RBP7.27□□□□□ -1.25
AFP-201ENST00000226359 CHL1O00533 1208 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 TJAP1Q5JTD0 557 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 STYK1Q6J9G0 422 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 NBPF10Q6P3W6 841 aaKnown RBP7.27□□□□□ -1.25
AFP-201ENST00000226359 NBPF15Q8N660 670 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 IBTKQ9P2D0 1353 aaPredicted RBP7.27□□□□□ -1.25
AFP-201ENST00000226359 ATP10DQ9P241 1426 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 KDM3BQ7LBC6 1761 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 NPR1P16066 1061 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 JUNDP17535 347 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 MASTLQ96GX5 879 aa7.27□□□□□ -1.25
AFP-201ENST00000226359 RNF123Q5XPI4 1314 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 DGAT1O75907 488 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 HSP90B1P14625 803 aaKnown RBP7.26□□□□□ -1.25
AFP-201ENST00000226359 MSS51Q4VC12 460 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 CCDC184Q52MB2 194 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 PHLDB3Q6NSJ2 640 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 C16orf71Q8IYS4 520 aaPredicted RBP7.26□□□□□ -1.25
AFP-201ENST00000226359 NKX2-3Q8TAU0 364 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 RPGRQ92834 1020 aaKnown RBP7.26□□□□□ -1.25
AFP-201ENST00000226359 DDX21Q9NR30 783 aaKnown RBP eCLIP7.26□□□□□ -1.25
AFP-201ENST00000226359 HYPKQ9NX55 129 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 RNF181Q9P0P0 153 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 ZMIZ1Q9ULJ6 1067 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 KIF13BQ9NQT8 1826 aa7.26□□□□□ -1.25
AFP-201ENST00000226359 ZC3H4Q9UPT8 1303 aaKnown RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 WIPF1O43516 503 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 DDX58O95786 925 aaKnown RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 F12P00748 615 aaPredicted RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 GPTP24298 496 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 AIMP1Q12904 312 aaKnown RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 NOM1Q5C9Z4 860 aaKnown RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 C9orf131Q5VYM1 1079 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 ZNF526Q8TF50 670 aaPredicted RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 STK31Q9BXU1 1019 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 DBF4Q9UBU7 674 aaPredicted RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 BCORQ6W2J9 1755 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 KDM2BQ8NHM5 1336 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 DXOO77932 396 aaKnown RBP7.25□□□□□ -1.25
AFP-201ENST00000226359 ADH1BP00325 375 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 LMNB1P20700 586 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 ALDH1B1P30837 517 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 SEMA3FQ13275 785 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 CCDC93Q567U6 631 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 CCDC30Q5VVM6 783 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 TTLL7Q6ZT98 887 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
AFP-201ENST00000226359 RBM17Q96I25 401 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms