RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 PUS7LQ9H0K6 701 aaKnown RBP17.76■□□□□ 0.43
CCDC47-201ENST00000225726 TAF6LQ9Y6J9 622 aa17.76■□□□□ 0.43
CCDC47-201ENST00000225726 CYP21A2P08686 494 aa17.76■□□□□ 0.43
CCDC47-201ENST00000225726 PDE6AP16499 860 aa17.76■□□□□ 0.43
CCDC47-201ENST00000225726 DDR1Q08345 913 aa17.76■□□□□ 0.43
CCDC47-201ENST00000225726 RPS6KB1P23443 525 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 MAP3K12Q12852 859 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 CRY2Q49AN0 593 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 ZNF532Q9HCE3 1301 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 TCRBV5S4A2TA0A5A2 114 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 NUCB2P80303 420 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
CCDC47-201ENST00000225726 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
CCDC47-201ENST00000225726 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
CCDC47-201ENST00000225726 GPAA1O43292 621 aa17.74■□□□□ 0.43
CCDC47-201ENST00000225726 GYG1P46976 350 aa17.74■□□□□ 0.43
CCDC47-201ENST00000225726 NRXN2Q9P2S2 1712 aa17.74■□□□□ 0.43
CCDC47-201ENST00000225726 COL23A1Q86Y22 540 aaPredicted RBP17.74■□□□□ 0.43
CCDC47-201ENST00000225726 ANKRD1Q15327 319 aa17.74■□□□□ 0.43
CCDC47-201ENST00000225726 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
CCDC47-201ENST00000225726 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 FAM84BQ96KN1 310 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-201ENST00000225726 SEMA3EO15041 775 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 VPS37DQ86XT2 251 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
CCDC47-201ENST00000225726 RBM17Q96I25 401 aaKnown RBP17.73■□□□□ 0.43
CCDC47-201ENST00000225726 SH2B1Q9NRF2 756 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-201ENST00000225726 LAMA4Q16363 1823 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 WTIPA6NIX2 430 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-201ENST00000225726 FOXP2O15409 715 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
CCDC47-201ENST00000225726 COL1A1P02452 1464 aaPredicted RBP17.72■□□□□ 0.43
CCDC47-201ENST00000225726 ZBTB22O15209 634 aa17.72■□□□□ 0.43
CCDC47-201ENST00000225726 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
CCDC47-201ENST00000225726 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
CCDC47-201ENST00000225726 MYH13Q9UKX3 1938 aa17.72■□□□□ 0.43
CCDC47-201ENST00000225726 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
CCDC47-201ENST00000225726 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-201ENST00000225726 MCM4P33991 863 aa17.71■□□□□ 0.43
CCDC47-201ENST00000225726 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
CCDC47-201ENST00000225726 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
CCDC47-201ENST00000225726 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 IMMTQ16891 758 aaKnown RBP17.7■□□□□ 0.42
CCDC47-201ENST00000225726 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-201ENST00000225726 IRS2Q9Y4H2 1338 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 ANKRD31Q8N7Z5 1873 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 KLRK1P26718 216 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 HOXA10P31260 410 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-201ENST00000225726 HIBADHP31937 336 aaKnown RBP17.7■□□□□ 0.42
CCDC47-201ENST00000225726 COL9A3Q14050 684 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-201ENST00000225726 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 GBP4Q96PP9 640 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 XDHP47989 1333 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
CCDC47-201ENST00000225726 E7EWF7 191 aa17.69■□□□□ 0.42
CCDC47-201ENST00000225726 FGAP02671 866 aa17.69■□□□□ 0.42
CCDC47-201ENST00000225726 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
CCDC47-201ENST00000225726 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-201ENST00000225726 LARGE1O95461 756 aa17.69■□□□□ 0.42
CCDC47-201ENST00000225726 TOB2Q14106 344 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-201ENST00000225726 TTLL5Q6EMB2 1281 aa17.69■□□□□ 0.42
CCDC47-201ENST00000225726 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
CCDC47-201ENST00000225726 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
CCDC47-201ENST00000225726 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
CCDC47-201ENST00000225726 ANKIB1Q9P2G1 1089 aa17.68■□□□□ 0.42
CCDC47-201ENST00000225726 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
CCDC47-201ENST00000225726 LRRC37AA6NMS7 1700 aa17.68■□□□□ 0.42
CCDC47-201ENST00000225726 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 BBOX1O75936 387 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 ALX1Q15699 326 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 ME3Q16798 604 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
CCDC47-201ENST00000225726 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 BRIP1Q9BX63 1249 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 MBD4O95243 580 aa17.67■□□□□ 0.42
CCDC47-201ENST00000225726 C15orf52Q6ZUT6 534 aaKnown RBP17.67■□□□□ 0.42
CCDC47-201ENST00000225726 CACNA1SQ13698 1873 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 GNAT2P19087 354 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 CAMKK2Q96RR4 588 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 ABCF2Q9UG63 623 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 EXOSC10Q01780 885 aaKnown RBP17.66■□□□□ 0.42
CCDC47-201ENST00000225726 PKP1Q13835 747 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 Q6ZUG5 572 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 PARP3Q9Y6F1 533 aa17.66■□□□□ 0.42
CCDC47-201ENST00000225726 PATL2C9JE40 543 aaKnown RBP17.65■□□□□ 0.42
CCDC47-201ENST00000225726 ZNF213O14771 459 aa17.65■□□□□ 0.42
CCDC47-201ENST00000225726 ATP2B4P23634 1241 aa17.65■□□□□ 0.42
CCDC47-201ENST00000225726 GPSM2P81274 684 aa17.65■□□□□ 0.42
CCDC47-201ENST00000225726 ZDHHC9Q9Y397 364 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms