RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TSC1Q92574 1164 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 C8orf37Q96NL8 207 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 ASXL1Q8IXJ9 1541 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 PDIA4P13667 645 aaKnown RBP15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 CHAMP1Q96JM3 812 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 FAM227BQ96M60 508 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 SLF2Q8IX21 1173 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 ZKSCAN5Q9Y2L8 839 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 STAMBPO95630 424 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 PLCB3Q01970 1234 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 FNBP4Q8N3X1 1017 aaPredicted RBP15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 POLKQ9UBT6 870 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 CCDC160A6NGH7 325 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 ST5P78524 1137 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 RAD51AP2Q09MP3 1159 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 TMEM87AQ8NBN3 555 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 TBC1D7Q9P0N9 293 aa15.44■□□□□ 0.06
TGFBR3-201ENST00000212355 CHMLP26374 656 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 PROCA1Q8NCQ7 364 aaPredicted RBP15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 POTEB2H3BUK9 544 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 C10orf67Q8IYJ2 551 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 USP26Q9BXU7 913 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 KCNK9Q9NPC2 374 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 CYLC1P35663 651 aaPredicted RBP15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 RMND1Q9NWS8 449 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 ZYXQ15942 572 aaKnown RBP15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 TIGD1Q96MW7 591 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 CCDC114Q96M63 670 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 CARD14Q9BXL6 1004 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 ARMT1Q9H993 441 aa15.43■□□□□ 0.06
TGFBR3-201ENST00000212355 VAMP4O75379 141 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 STAMQ92783 540 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 RNF113AO15541 343 aaKnown RBP15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 UBLCP1Q8WVY7 318 aaPredicted RBP15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 TCHPQ9BT92 498 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 PRDM1O75626 825 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 CLCN1P35523 988 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 PTPROQ16827 1216 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 FBF1Q8TES7 1133 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 UAP1Q16222 522 aaPredicted RBP15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 KIF4AO95239 1232 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 LETM2Q2VYF4 491 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 GOLGA1Q92805 767 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 DNMBPQ6XZF7 1577 aa15.42■□□□□ 0.06
TGFBR3-201ENST00000212355 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 IRS4O14654 1257 aaPredicted RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 SLU7O95391 586 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 HINFPQ9BQA5 517 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 NSFL1CQ9UNZ2 370 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 GTF2A1P52655 376 aaPredicted RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 TAF5LO75529 589 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 DDX39AO00148 427 aaKnown RBP15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 MBD4O95243 580 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 TRIM75PA6NK02 468 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 CCDC6Q16204 474 aa15.41■□□□□ 0.06
TGFBR3-201ENST00000212355 MAPKBP1O60336 1514 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 SORBS3O60504 671 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 NBPF7P0C2Y1 421 aaPredicted RBP15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 PHKBQ93100 1093 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 PSMA7O14818 248 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 ERCC5P28715 1186 aaPredicted RBP15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 GOLGA6L9A6NEM1 432 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 KRT9P35527 623 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 ANKRD36BQ8N2N9 1353 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 CKAP4Q07065 602 aaKnown RBP15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
TGFBR3-201ENST00000212355 FAM13AO94988 1023 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 KRT5P13647 590 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 CCDC42Q96M95 316 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 TRIM31Q9BZY9 425 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 LDHCP07864 332 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 TMCO4Q5TGY1 634 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 PIK3AP1Q6ZUJ8 805 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 CTAGE1Q96RT6 745 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 TACC1O75410 805 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 NEK11Q8NG66 645 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 ZBTB40Q9NUA8 1239 aa15.39■□□□□ 0.05
TGFBR3-201ENST00000212355 KIF5AQ12840 1032 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms