RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SOX15O60248 233 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 OR5AC1P0C628 307 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 KLK2P20151 261 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 CD200P41217 278 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 SUCLG1P53597 346 aaKnown RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 HNF4GQ14541 408 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 TAF9Q16594 264 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 LRRC18Q8N456 261 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 R3HDM4Q96D70 268 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 ZNF799Q96GE5 643 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 FAAP24Q9BTP7 215 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 SLC25A31Q9H0C2 315 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 OPN3Q9H1Y3 402 aaPredicted RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 PLEK2Q9NYT0 353 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 CCDC187A0A096LP49 1063 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 ZNF705GA8MUZ8 300 aaPredicted RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 DVL1O14640 695 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 XRCC2O43543 280 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 OPRM1P35372 400 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 RRADP55042 308 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 FXYD4P59646 89 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 TMEM187Q14656 261 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 WDR74Q6RFH5 385 aaPredicted RBP7.57□□□□□ -1.2
VCL-207ENST00000624354 FBXW12Q6X9E4 464 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 LYZL2Q7Z4W2 148 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 GPR137CQ8N3F9 429 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 OR10J5Q8NHC4 309 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 RAB39BQ96DA2 213 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 GINS3Q9BRX5 216 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 GPR173Q9NS66 373 aa7.57□□□□□ -1.2
VCL-207ENST00000624354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 DTYMKP23919 212 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 FHITP49789 147 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 ENDOGQ14249 297 aaKnown RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 IL13RA2Q14627 380 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 CPEB2Q7Z5Q1 589 aaKnown RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 CADM4Q8NFZ8 388 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 MAFAQ8NHW3 353 aaPredicted RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 DTD1Q8TEA8 209 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 FRZBQ92765 325 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 SPTSSAQ969W0 71 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 SPSB1Q96BD6 273 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 SYT3Q9BQG1 590 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 RBM24Q9BX46 236 aaKnown RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 AK3Q9UIJ7 227 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 NXT1Q9UKK6 140 aaKnown RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 HSF4Q9ULV5 492 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 SPTBN4Q9H254 2564 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 FRYQ5TBA9 3013 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 H3BQ15 152 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 M0R143 59 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 ST8SIA3O43173 380 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 ANGPTL7O43827 346 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 DBHP09172 617 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 GZMBP10144 247 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 DUSP1P28562 367 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 CEBPGP53567 150 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 C10orf128Q5T292 105 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 PRAMEF20Q5VT98 475 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 C5orf24Q7Z6I8 188 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 LGI3Q8N145 548 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 TMEM156Q8N614 296 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 SPACA9Q96E40 222 aaPredicted RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 PHF7Q9BWX1 381 aaPredicted RBP7.56□□□□□ -1.2
VCL-207ENST00000624354 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 DEFB126Q9BYW3 111 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 LIME1Q9H400 295 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 WFDC1Q9HC57 220 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 B3GALT1Q9Y5Z6 326 aa7.56□□□□□ -1.2
VCL-207ENST00000624354 A0A087WWC5 75 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 NPIPA2E9PIF3 369 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 NPIPA3F8WFD2 350 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 DHHO43323 396 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 C1QL1O75973 258 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 OTX1P32242 354 aaPredicted RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 ERVFRD-1P60508 538 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SHBQ15464 509 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 RSPO1Q2MKA7 263 aaPredicted RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 TSPO2Q5TGU0 170 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 Q6ZSR3 168 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 LRTM2Q8N967 370 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 LFNGQ8NES3 379 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 ABHD5Q8WTS1 349 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 NSG1A0A0A6YYJ2 146 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 FAM230AA0A1W2PPH8 454 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 MASP2O00187 686 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 DLEU1O43261 78 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SPRY1O43609 319 aaPredicted RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 ZNF205O95201 554 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 GLI4P10075 376 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 APLNRP35414 380 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms