RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 IL36GQ9NZH8 169 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 SF3B6Q9Y3B4 125 aaKnown RBP13.66□□□□□ -0.22
SSBP4-213ENST00000602088 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 LINC00312Q9Y6C7 94 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 MEIOCA2RUB1 952 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 HTR3BO95264 441 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 RBP4P02753 201 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 MAS1P04201 325 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 CSN2P05814 226 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 FBP1P09467 338 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 P2RX3P56373 397 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 IL13RA2Q14627 380 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 INSL4Q14641 139 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 GCDHQ92947 438 aaPredicted RBP13.65□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF714Q96N38 554 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 S100A13Q99584 98 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 TMED9Q9BVK6 235 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 PPA2Q9H2U2 334 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 ISYNA1Q9NPH2 558 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 ING4Q9UNL4 249 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 RRP15Q9Y3B9 282 aaKnown RBP13.65□□□□□ -0.22
SSBP4-213ENST00000602088 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
SSBP4-213ENST00000602088 DENRO43583 198 aaKnown RBP13.64□□□□□ -0.23
SSBP4-213ENST00000602088 SC5DO75845 299 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 MAP2K4P45985 399 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 IER3P46695 156 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 COMPP49747 757 aaPredicted RBP13.64□□□□□ -0.23
SSBP4-213ENST00000602088 GP2P55259 537 aaKnown RBP13.64□□□□□ -0.23
SSBP4-213ENST00000602088 AESQ08117 197 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 TPBGQ13641 420 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 MIDNQ504T8 468 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 NHLRC3Q5JS37 347 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 LIPKQ5VXJ0 399 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 C16orf87Q6PH81 154 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 ZNF782Q6ZMW2 699 aaPredicted RBP13.64□□□□□ -0.23
SSBP4-213ENST00000602088 LYPD6Q86Y78 171 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 OSR2Q8N2R0 312 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 JAGN1Q8N5M9 183 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 TMEM86BQ8N661 226 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 UFD1Q92890 307 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
SSBP4-213ENST00000602088 TRAV24A0A0B4J272 114 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 FUOMA2VDF0 154 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 ZNF780AO75290 641 aaPredicted RBP13.63□□□□□ -0.23
SSBP4-213ENST00000602088 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
SSBP4-213ENST00000602088 HKR1P10072 659 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 GLIPR1P48060 266 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 FAM27D1Q5T7N8 215 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 CORO2AQ92828 525 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 COQ2Q96H96 371 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 AJUBAQ96IF1 538 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 PCDHB16Q9NRJ7 776 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 ZNRD1Q9P1U0 126 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 ST3GAL6Q9Y274 331 aa13.63□□□□□ -0.23
SSBP4-213ENST00000602088 UBE2J1Q9Y385 318 aaPredicted RBP13.63□□□□□ -0.23
SSBP4-213ENST00000602088 MEGF11A6BM72 1044 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 HSMCR30P0CW71 290 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
SSBP4-213ENST00000602088 MLLT11Q13015 90 aaPredicted RBP13.62□□□□□ -0.23
SSBP4-213ENST00000602088 GPR176Q14439 515 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 SLC22A6Q4U2R8 563 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 KIAA2026Q5HYC2 2103 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 MUL1Q969V5 352 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 MGLLQ99685 303 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 Q9H521 79 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 IFT22Q9H7X7 185 aa13.62□□□□□ -0.23
SSBP4-213ENST00000602088 MRPS28Q9Y2Q9 187 aaKnown RBP13.62□□□□□ -0.23
SSBP4-213ENST00000602088 TRGV10A0A0A0MS01 117 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 A0A1W2PP11 408 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 ODAMA1E959 279 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 PAHP00439 452 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 UCHL1P09936 223 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 GTF2F2P13984 249 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 CPEP16870 476 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 SRMP19623 302 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 SERPINA2P20848 420 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 COX7A1P24310 79 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 ATXN7L3Q14CW9 347 aaPredicted RBP13.61□□□□□ -0.23
SSBP4-213ENST00000602088 TBCEQ15813 527 aaPredicted RBP13.61□□□□□ -0.23
SSBP4-213ENST00000602088 PAN3Q58A45 887 aaKnown RBP13.61□□□□□ -0.23
SSBP4-213ENST00000602088 KRBOX4Q5JUW0 171 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 GLIPR1L1Q6UWM5 242 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 TMEM91Q6ZNR0 172 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 BEND2Q8NDZ0 799 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 OR11H6Q8NGC7 330 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 OR13D1Q8NGV5 346 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
SSBP4-213ENST00000602088 PHYHIPQ92561 330 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms