RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 B9D1Q9UPM9 204 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IER3IP1Q9Y5U9 82 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ANK3Q12955 4377 aaKnown RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 DSCAML1Q8TD84 2053 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 LRP5LA4QPB2 252 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARRDC5A6NEK1 342 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OOEPA6NGQ2 149 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZSCAN5BA6NJL1 495 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 IQCF6A8MYZ5 107 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CLDN25C9JDP6 229 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 LYNX1G3V0Z9 82 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 H7C1C5 153 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 K7EQG2 157 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 DCTN6O00399 190 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 BHLHE40O14503 412 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR10H3O60404 316 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC16A7O60669 478 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 DIRAS1O95057 198 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 RENP00797 406 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 IGHV1-46P01743 117 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 LYNX1P0DP58 116 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 HIST1H1CP16403 213 aaKnown RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TCN1P20061 433 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 GSTM3P21266 225 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCNOP22674 350 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 RRM2P31350 389 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 IL2RGP31785 369 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 FCGR2BP31994 310 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 FCGR2CP31995 323 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OTX1P32242 354 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 MPV17P39210 176 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 MAGEB1P43366 347 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 HTR5AP47898 357 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 BLVRAP53004 296 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 LCN6P62502 163 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCL8P80075 99 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPIBQ01892 262 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ECH1Q13011 328 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TRIP10Q15642 601 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CARTPTQ16568 116 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 PCK2Q16822 640 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF181Q2M3W8 571 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 RSPO1Q2MKA7 263 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 HFEQ30201 348 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC36A3Q495N2 470 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TEX30Q5JUR7 227 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2T5Q6IEZ7 315 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF620Q6ZNG0 422 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 AQP12AQ8IXF9 295 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR6V1Q8N148 313 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TEX29Q8N6K0 151 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF283Q8N7M2 679 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCDC197Q8NCU1 140 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR5L1Q8NGL2 311 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR13C5Q8NGS8 318 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2T29Q8NH02 315 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR52J3Q8NH60 311 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR1F12Q8NHA8 337 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CLDND2Q8NHS1 167 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 FANK1Q8TC84 345 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM158Q8WZ71 300 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 RAB1CQ92928 201 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ITFG2Q969R8 447 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 APOBEC3DQ96AK3 386 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM186Q96B77 213 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 RAB39BQ96DA2 213 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ASB9Q96DX5 294 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 SAMD8Q96LT4 415 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 ERMAPQ96PL5 475 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 NMNAT3Q96T66 252 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 OCR1Q9BZK8 76 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 FAM107BQ9H098 131 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPR173Q9NS66 373 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 DDX28Q9NUL7 540 aaKnown RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 PLEK2Q9NYT0 353 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TAS2R1Q9NYW7 299 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 IL19Q9UHD0 177 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CYB5R1Q9UHQ9 305 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 PURGQ9UJV8 347 aaKnown RBP2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMCC3Q9ULS5 477 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 FZR1Q9UM11 496 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 BAIAP2Q9UQB8 552 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 STARD10Q9Y365 291 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 LHFPL6Q9Y693 200 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 CDH10Q9Y6N8 788 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
CKS1BP3-201ENST00000600888 J3QLI3 93 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TNFRSF11BO00300 401 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 RER1O15258 196 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 PHF1O43189 567 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIHO43447 177 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 BCL2L11O43521 198 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TIMM8AO60220 97 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCNB2O95067 398 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MPZL1O95297 269 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 PTBP3O95758 552 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 IGHV2-5P01817 119 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MSMBP08118 114 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 ACSM4P0C7M7 580 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms