RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 S100A8P05109 93 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 LCKP06239 509 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 CD14P08571 375 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PAX1P15863 534 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SLC25A16P16260 332 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 S100PP25815 95 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 CRABP1P29762 137 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 CRYBB2P43320 205 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 MAGEA2P43356 314 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PPOXP50336 477 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PDLIM4P50479 330 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 EFNA4P52798 201 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SPCS3P61009 180 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ERVK-25P63136 954 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 FMODQ06828 376 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 FLOT2Q14254 428 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 EFNB3Q15768 340 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 KCNJ8Q15842 424 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ANXA2RQ3ZCQ2 193 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ARMCX4Q5H9R4 360 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 C10orf128Q5T292 105 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 RPL13AP3Q6NVV1 102 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SMARCD3Q6STE5 483 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ARL9Q6T311 187 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SKA3Q8IX90 412 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ARIH2OSQ8N7S6 290 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 OR9G4Q8NGQ1 327 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SLC7A13Q8TCU3 470 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SSMEM1Q8WWF3 244 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 TRUB1Q8WWH5 349 aaKnown RBP3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SGK494Q96LW2 274 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 TSPAN32Q96QS1 320 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 TNFRSF13CQ96RJ3 184 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 REEP1Q9H902 201 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 SIAEQ9HAT2 523 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PLCXD1Q9NUJ7 323 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 USE1Q9NZ43 259 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 C1RLQ9NZP8 487 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ZNF346Q9UL40 294 aaKnown RBP3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PRELID3BQ9Y3B1 194 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 PCDHGB1Q9Y5G3 927 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 KPTNQ9Y664 436 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 MPDZO75970 2070 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 FBN2P35556 2912 aa3.94□□□□□ -1.78
ZNF540-204ENST00000586792 ADGRG4Q8IZF6 3080 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 NAV2Q8IVL1 2488 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TRBV4-1A0A0J9YWV2 114 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 A0A1B0GW15 77 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 ISPDA4D126 451 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 PRSS37A4D1T9 235 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 C5orf49A4QMS7 147 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 H7C1C5 153 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 J3QR06 171 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 FFAR1O14842 300 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 RAB29O14966 203 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 PPP1R3DO95685 299 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 FADS2O95864 444 aaKnown RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 IGHV4-39P01824 125 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 MBPP02686 304 aaPredicted RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 IFNA4P05014 189 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 SMIM6P0DI80 62 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TRAPPC2P0DI81 140 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TRAPPC2BP0DI82 140 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 ZNF14P17017 642 aaPredicted RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 ZNF32P17041 273 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 CHATP28329 748 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 CALCRP30988 508 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 GLRXP35754 106 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 NPBWR2P48146 333 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 KLF3P57682 345 aaPredicted RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 AP3S2P59780 193 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 LCN6P62502 163 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 GAGE2BQ13066 116 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 UBE2V1Q13404 147 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 MED21Q13503 144 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 SMCO1Q147U7 214 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 HIST3H3Q16695 136 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 C2orf68Q2NKX9 166 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 C5orf47Q569G3 176 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 FAM27BQ5VT28 67 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 LIPNQ5VXI9 398 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 RNLSQ5VYX0 342 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 C11orf71Q6IPW1 123 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 LCN8Q6JVE9 175 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 DPY19L2P2Q6ZN68 376 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 MRPL21Q7Z2W9 205 aaKnown RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
ZNF540-204ENST00000586792 C1orf174Q8IYL3 243 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 SVOPLQ8N434 492 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 ZNF525Q8N782 197 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 STXBP6Q8NFX7 210 aa3.93□□□□□ -1.78
ZNF540-204ENST00000586792 OR5AU1Q8NGC0 362 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms