RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 ADTRPQ96IZ2 230 aa1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 UTP23Q9BRU9 249 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 TSGA10Q9BZW7 698 aa1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 TUBA4BQ9H853 241 aa1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 ZNF286AQ9HBT8 521 aa1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 RPRD1BQ9NQG5 326 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 SLC22A14Q9Y267 594 aa1.43□□□□□ -2.18
SMCHD1-207ENST00000581711 A0A1B0GXF2 115 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 H3BP45 60 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 UPK2O00526 184 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 ENSAO43768 121 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 PDYNP01213 254 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 MBP02144 154 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 OPN1SWP03999 348 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 MSR1P21757 451 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 IL12BP29460 328 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 GPR4P46093 362 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 BNIP2Q12982 314 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 Q6ZRU5 148 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 CNPY4Q8N129 248 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 OR52K1Q8NGK4 314 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 OR2V1Q8NHB1 315 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 MFSD8Q8NHS3 518 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 PYURFQ96I23 114 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 CYB5R1Q9UHQ9 305 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 V9GYY9 64 aa1.42□□□□□ -2.18
SMCHD1-207ENST00000581711 MYO9BQ13459 2157 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 CYP4Z1Q86W10 505 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 OR8K1Q8NGG5 319 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 OR4K13Q8NH42 304 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 BLNKQ8WV28 456 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 PRORYQ9H606 182 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 LRRC19Q9H756 370 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 ACOT13Q9NPJ3 140 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 URGCP-MRPS24S4R325 110 aa1.41□□□□□ -2.18
SMCHD1-207ENST00000581711 PLXNA3P51805 1871 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 TRBV24-1A0A075B6N3 115 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 A0A1W2PPV4 95 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 OR5H14A6NHG9 310 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 CD300LBA8K4G0 201 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 M0QXV9 152 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 ZNF593O00488 134 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 GATCO43716 136 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 MYO1DO94832 1006 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 IGKV5-2P06315 115 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 CECR9P0C854 216 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 PRTN3P24158 256 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 HTR2CP28335 458 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 XKP51811 444 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 TNXAQ16473 311 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 NXNL2Q5VZ03 156 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 ELP2Q6IA86 826 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 NIPAL1Q6NVV3 410 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 OR11G2Q8NGC1 345 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 OR4A5Q8NH83 315 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 FAM131CQ96AQ9 280 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 CPB2Q96IY4 423 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 CRLF2Q9HC73 371 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 SLC23A2Q9UGH3 650 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 HSPE1-MOB4S4R3N1 261 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 CACNA1GO43497 2377 aa1.4□□□□□ -2.19
SMCHD1-207ENST00000581711 GBF1Q92538 1859 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 ADAMTS7Q9UKP4 1686 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 A0A0J9YYE9 177 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 C17orf98A8MV24 154 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 LECT2O14960 151 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 SH2D1AO60880 128 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 CRTAPO75718 401 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 GPR75O95800 540 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 TRBC1P01850 177 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 OR12D1P0DN82 309 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 SFTPCP11686 197 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 EVI2BP34910 448 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 C16orf87Q6PH81 154 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 RNASE11Q8TAA1 199 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 OLFM3Q96PB7 478 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 MAP1LC3CQ9BXW4 147 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 SLC25A31Q9H0C2 315 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 WDR55Q9H6Y2 383 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 ANKHQ9HCJ1 492 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 RABL2AQ9UBK7 228 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 ADGRB3O60242 1522 aa1.39□□□□□ -2.19
SMCHD1-207ENST00000581711 UNC79Q9P2D8 2635 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 TRPM3Q9HCF6 1732 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 IGHV1-45A0A0A0MS14 117 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 TRAV8-3A0A0A6YYJ7 113 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 KLRC4-KLRK1H3BQV0 150 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 CD8AP01732 235 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 PRKACAP17612 351 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 ARR3P36575 388 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 PLTPP55058 493 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 ATP5J2P56134 94 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 RAB25P57735 213 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 GUSBP1Q15486 140 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 C10orf91Q5T1B1 145 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 FAM19A1Q7Z5A9 133 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 ZNF321PQ8N8H1 164 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 DNAAF3Q8N9W5 541 aa1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 DRAXINQ8NBI3 349 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-207ENST00000581711 OR51Q1Q8NH59 317 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms