RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RAB3AP20336 220 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 AESQ08117 197 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 MED21Q13503 144 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 DOC2BQ14184 412 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 ATXN7L3Q14CW9 347 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 CCDC58Q4VC31 144 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 PRAMEF5Q5TYX0 476 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 ASPHD2Q6ICH7 369 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 SAXO1Q8IYX7 474 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 STX19Q8N4C7 294 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 ZNF485Q8NCK3 441 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 OR11H6Q8NGC7 330 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 OR52N1Q8NH53 320 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 NDNFQ8TB73 568 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 RPS4Y2Q8TD47 263 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 GPR148Q8TDV2 347 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 MALSU1Q96EH3 234 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 CPNE2Q96FN4 548 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 NR1H4Q96RI1 486 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 CLEC7AQ9BXN2 247 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 TMEM133Q9H2Q1 129 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 PLCXD1Q9NUJ7 323 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 CNOT2Q9NZN8 540 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 UBE2J1Q9Y385 318 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-213ENST00000573519 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 A0A0G2JK05 382 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 FAM172BPA6NC97 362 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 PTGES3LE9PB15 166 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 HSPB6O14558 160 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 CHST1O43916 411 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 CD2P06729 351 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 ERP29P30040 261 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 GLIPR1P48060 266 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 ZP1P60852 638 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 KRBOX4Q5JUW0 171 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 DMKNQ6E0U4 476 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 TMEM219Q86XT9 240 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 TNFAIP8L1Q8WVP5 186 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 SGCDQ92629 289 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 GHSRQ92847 366 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 SMIM19Q96E16 107 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 NPFFR1Q9GZQ6 430 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 RHOFQ9HBH0 211 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 TCF19Q9Y242 345 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 ZNF281Q9Y2X9 895 aa10.27□□□□□ -0.77
NPLOC4-213ENST00000573519 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 H0YJX3 145 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 F2RL2O00254 374 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 GABRPO00591 440 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 MYL12BO14950 172 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 WIPF1O43516 503 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 MMP23AO75900 390 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 ALX3O95076 343 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 VSIG10L2P0DP72 767 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 JUNBP17275 347 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 CDK2P24941 298 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 LMO1P25800 156 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 KIR2DS4P43632 304 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 MTNR1BP49286 362 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 RSU1Q15404 277 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 C6orf141Q5SZD1 244 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 ZNF529Q6P280 563 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 Q6P435 159 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 BAIAP2L2Q6UXY1 529 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 Q6ZTK2 550 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 OR10K1Q8NGX5 313 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 TMEM106AQ96A25 262 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 MMP27Q9H306 513 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 RANBP3Q9H6Z4 567 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 FKBP14Q9NWM8 211 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 PITPNC1Q9UKF7 332 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 FOXJ3Q9UPW0 622 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 TRRAPQ9Y4A5 3859 aa10.26□□□□□ -0.77
NPLOC4-213ENST00000573519 TRBV5-5A0A0J9YX44 114 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 A0A1W2PPK0 400 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 ODAMA1E959 279 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 H0YHG0 523 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 HTR3BO95264 441 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 TSPAN15O95858 294 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 HTR1DP28221 377 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 PTGFRP43088 359 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 EFNB2P52799 333 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 RPS11P62280 158 aaKnown RBP eCLIP10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 PPP3R1P63098 170 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 HERPUD1Q15011 391 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 PAN3Q58A45 887 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 MINOS1Q5TGZ0 78 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 OR52W1Q6IF63 320 aa10.25□□□□□ -0.77
NPLOC4-213ENST00000573519 CCBE1Q6UXH8 406 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms