RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 NDNFQ8TB73 568 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 CFHR4Q92496 578 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 CPNE2Q96FN4 548 aaPredicted RBP13.05□□□□□ -0.32
DDX55-212ENST00000544738 SPACA5Q96QH8 159 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 ISG20L2Q9H9L3 353 aaKnown RBP13.05□□□□□ -0.32
DDX55-212ENST00000544738 AMBNQ9NP70 447 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 MRPS18AQ9NVS2 196 aaKnown RBP13.05□□□□□ -0.32
DDX55-212ENST00000544738 FAM118AQ9NWS6 357 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 TAS2R3Q9NYW6 316 aa13.05□□□□□ -0.32
DDX55-212ENST00000544738 A6NDX4 124 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 EBAG9O00559 213 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 SULT1B1O43704 296 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 CSN2P05814 226 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 HCKP08631 526 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 TMEM225BP0DP42 221 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 ZNF44P15621 663 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 HTR1DP28221 377 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 IL18R1Q13478 541 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 KISS1Q15726 138 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 LDLRAD2Q5SZI1 272 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 Q8N2B8 174 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 OR5D18Q8NGL1 313 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 CORO2AQ92828 525 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 PRSS22Q9GZN4 317 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 MMP28Q9H239 520 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 HILPDAQ9Y5L2 63 aa13.04□□□□□ -0.32
DDX55-212ENST00000544738 F2RL2O00254 374 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 MAGEB3O15480 346 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 VSIG10L2P0DP72 767 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 EMX1Q04741 257 aaPredicted RBP13.03□□□□□ -0.32
DDX55-212ENST00000544738 SLC34A1Q06495 639 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 CD69Q07108 199 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 SCN1BQ07699 218 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 LPCAT4Q643R3 524 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 HEPN1Q6WQI6 88 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 ZNF555Q8NEP9 628 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 OR52I1Q8NGK6 324 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 TSEN15Q8WW01 171 aaKnown RBP13.03□□□□□ -0.32
DDX55-212ENST00000544738 ZNF649Q9BS31 505 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 RYR2Q92736 4967 aa13.03□□□□□ -0.32
DDX55-212ENST00000544738 MEGF11A6BM72 1044 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 E9PI62 339 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 DEGS1O15121 323 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 IGLL1P15814 213 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 CDK2P24941 298 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 GLIPR1P48060 266 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 MTNR1BP49286 362 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 ARHGDIBP52566 201 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 BDH1Q02338 343 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 AESQ08117 197 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 CCDC58Q4VC31 144 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 ZNF691Q5VV52 312 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 RNF144BQ7Z419 303 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 TMEM219Q86XT9 240 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 CREB3L1Q96BA8 519 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 JAM3Q9BX67 310 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 SERTAD4Q9NUC0 356 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 DPM3Q9P2X0 92 aa13.02□□□□□ -0.33
DDX55-212ENST00000544738 ODAMA1E959 279 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 PEX14O75381 377 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 MMP23AO75900 390 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 ALDOBP05062 364 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 CD2P06729 351 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 RAB3AP20336 220 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 BRS3P32247 399 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 ZP1P60852 638 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 Q6P435 159 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 RPL22L1Q6P5R6 122 aaKnown RBP13.01□□□□□ -0.33
DDX55-212ENST00000544738 PXT1Q8NFP0 134 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 OR4P4Q8NGL7 312 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 FGF20Q9NP95 211 aaPredicted RBP13.01□□□□□ -0.33
DDX55-212ENST00000544738 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
DDX55-212ENST00000544738 OR6C3Q9NZP0 311 aa13.01□□□□□ -0.33
DDX55-212ENST00000544738 IRGMA1A4Y4 181 aa13□□□□□ -0.33
DDX55-212ENST00000544738 ZNF729A6NN14 1252 aaPredicted RBP13□□□□□ -0.33
DDX55-212ENST00000544738 LEUTXA8MZ59 168 aa13□□□□□ -0.33
DDX55-212ENST00000544738 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
DDX55-212ENST00000544738 FBXO24O75426 580 aa13□□□□□ -0.33
DDX55-212ENST00000544738 BAG2O95816 211 aa13□□□□□ -0.33
DDX55-212ENST00000544738 LIMS3P0CW19 117 aa13□□□□□ -0.33
DDX55-212ENST00000544738 LIMS4P0CW20 117 aa13□□□□□ -0.33
DDX55-212ENST00000544738 DCKP27707 260 aa13□□□□□ -0.33
DDX55-212ENST00000544738 CD34P28906 385 aa13□□□□□ -0.33
DDX55-212ENST00000544738 CEACAM3P40198 252 aa13□□□□□ -0.33
DDX55-212ENST00000544738 PTGFRP43088 359 aa13□□□□□ -0.33
DDX55-212ENST00000544738 PRRX1P54821 245 aa13□□□□□ -0.33
DDX55-212ENST00000544738 CDK5R1Q15078 307 aa13□□□□□ -0.33
DDX55-212ENST00000544738 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms