RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZNF83P51522 516 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SSX1Q16384 188 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 NUFIP2Q7Z417 695 aaKnown RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 MYEOVQ96EZ4 313 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 PPIL1Q9Y3C6 166 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ANKRD36CQ5JPF3 1778 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 RER1O15258 196 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 G6PCP35575 357 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 RAE1P78406 368 aaKnown RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 DEGS2Q6QHC5 323 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ZNF707Q96C28 371 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 FZR1Q9UM11 496 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SLC17A3O00476 420 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 PDCD6O75340 191 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 MBPP02686 304 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 PRSS1P07477 247 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SFTPCP11686 197 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 RPS4Y1P22090 263 aaKnown RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 LYZP61626 148 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 NKG7Q16617 165 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ZNF766Q5HY98 468 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 JMJD6Q6NYC1 403 aaPredicted RBP8.83□□□□□ -1
COL4A6-208ENST00000538570 LRRC61Q9BV99 259 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ARRDC1-AS1Q9H2J1 176 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 TMEM167BQ9NRX6 74 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SIRT5Q9NXA8 310 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ZFPL1O95159 310 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 CXCL3P19876 107 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 HERVK_113P61574 105 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 IL24Q13007 206 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 GAMTQ14353 236 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 TMEM240Q5SV17 173 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 HES3Q5TGS1 186 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 ANKRD33Q7Z3H0 272 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 SFRP2Q96HF1 295 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 LRRC3BQ96PB8 259 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 TSPAN32Q96QS1 320 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 NPTNQ9Y639 398 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 BTAF1O14981 1849 aa8.83□□□□□ -1
COL4A6-208ENST00000538570 LMO7DNF2Z398 122 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 K7ESF4 209 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 LANCL1O43813 399 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 PRR35P0CG20 571 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 DYNLT3P51808 116 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 HFEQ30201 348 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 ZNF774Q6NX45 483 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 PDPNQ86YL7 162 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 NPEPL1Q8NDH3 523 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 DNAJB12Q9NXW2 375 aaKnown RBP8.82□□□□□ -1
COL4A6-208ENST00000538570 UFC1Q9Y3C8 167 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 ANKRD20A5PA0PJZ0 165 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
COL4A6-208ENST00000538570 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
COL4A6-208ENST00000538570 HLA-GP17693 338 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 B4GALNT1Q00973 533 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 WDR31Q8NA23 367 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 OR11H7Q8NGC8 314 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 RFESDQ8TAC1 157 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 OR2A5Q96R48 311 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 hADV38S2A0JD32 116 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 PRF1P14222 555 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 ORM2P19652 201 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 INSL4Q14641 139 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 DOLPP1Q86YN1 238 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 OR1B1Q8NGR6 318 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 RAB33BQ9H082 229 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 SPTY2D1-AS1A0A0U1RR47 76 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 PCMT1P22061 227 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 TMEM196Q5HYL7 178 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 SCGB1D4Q6XE38 83 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 C5orf17Q8NAS9 161 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 LRRC29Q8WV35 223 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 NTMQ9P121 344 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
COL4A6-208ENST00000538570 IGHV3-43A0A0B4J1X8 118 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 TRAV17A0A0B4J275 112 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 PPIHO43447 177 aaKnown RBP8.82□□□□□ -1
COL4A6-208ENST00000538570 SOD3P08294 240 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 IGHV3-43DP0DP04 118 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 KLRB1Q12918 225 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 BSXQ3C1V8 233 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 DGAT2L7PQ6IED9 249 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 SLC6A13Q9NSD5 602 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 TINAGQ9UJW2 476 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 TBX21Q9UL17 535 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 HSF4Q9ULV5 492 aa8.82□□□□□ -1
COL4A6-208ENST00000538570 ASPDHA6ND91 283 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 ZNF253O75346 499 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 ZNF32P17041 273 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 RPL30P62888 115 aaKnown RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 PABPC1L2AQ5JQF8 200 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms