RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NAA40Q86UY6 237 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 BOD1L2Q8IYS8 172 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 PUSL1Q8N0Z8 303 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 CSNK2A3Q8NEV1 391 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OR56B1Q8NGI3 324 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OR13C9Q8NGT0 318 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OR6N2Q8NGY6 317 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OTOSQ8NHW6 89 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SYNPRQ8TBG9 265 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 DYNC2LI1Q8TCX1 351 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 RNASE8Q8TDE3 154 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 FAM46BQ96A09 425 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SLAMF6Q96DU3 332 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 MBOAT4Q96T53 435 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ATF6BQ99941 703 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 ABHD6Q9BV23 337 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 C1QTNF5Q9BXJ0 243 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 OR2J1Q9GZK6 312 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 TOR3AQ9H497 397 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 GPN1Q9HCN4 374 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 FAM118AQ9NWS6 357 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 HAO2Q9NYQ3 351 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 FBXL17Q9UF56 701 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 FZR1Q9UM11 496 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 SLC45A2Q9UMX9 530 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 TEX15Q9BXT5 2789 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 POLQO75417 2590 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 AKAP6Q13023 2319 aa5.34□□□□□ -1.55
ATPAF1-209ENST00000529214 LOC100130705A0A1B0GUX0 176 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 F5H5K5 113 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 M0R129 80 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 LANCL1O43813 399 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SELENOFO60613 162 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 IFNA21P01568 189 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 RLN2P04090 185 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 MYF6P23409 242 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 PPOXP50336 477 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 MMP15P51511 669 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 NUDT6P53370 316 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 HCCSP53701 268 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 ELLP55199 621 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 KLF3P57682 345 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SNRPGP62308 76 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SNRPD2P62316 118 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 EIF2B1Q14232 305 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 GGTLC2Q14390 218 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 NKPD1Q17RQ9 610 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 CDNFQ49AH0 187 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 C17orf107Q6ZR85 190 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SLC16A9Q7RTY1 509 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 ANGPTL5Q86XS5 388 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 ZCCHC24Q8N2G6 241 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 PACRGLQ8N7B6 248 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 OR4M2Q8NGB6 313 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 OR5L1Q8NGL2 311 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 OR11L1Q8NGX0 322 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 ABHD4Q8TB40 342 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SLC25A40Q8TBP6 338 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 KLF14Q8TD94 323 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 THEM6Q8WUY1 208 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 RNF133Q8WVZ7 376 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 S100ZQ8WXG8 99 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SPTSSAQ969W0 71 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 APOBEC3DQ96AK3 386 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 RDH12Q96NR8 316 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SYT3Q9BQG1 590 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 MCUBQ9NWR8 336 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 ONECUT1Q9UBC0 465 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SMPXQ9UHP9 88 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 SSR3Q9UNL2 185 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 PSG11Q9UQ72 335 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 UBE2J1Q9Y385 318 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 URGCP-MRPS24S4R325 110 aa5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 PRRC2AP48634 2157 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-209ENST00000529214 MPTX1A8MV57 137 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 KRBOX1C9JBD0 128 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 ZNF878C9JN71 531 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 K7EP13 123 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 M0R135 149 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 OGG1O15527 345 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 PAGE4O60829 102 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 DFFBO76075 338 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 IGHV4-39P01824 125 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 LCATP04180 440 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 ADRA2AP08913 450 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 TRAPPC2P0DI81 140 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 TRAPPC2BP0DI82 140 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 GYPEP15421 78 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 HTR1FP30939 366 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 LIPAP38571 399 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 MPV17P39210 176 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 ID1P41134 155 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 OPRL1P41146 370 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 EFNA4P52798 201 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 FAM3BP58499 235 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 GRB2P62993 217 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 HERV-K104P63124 156 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 PSG7Q13046 419 aa5.32□□□□□ -1.56
ATPAF1-209ENST00000529214 TAF13Q15543 124 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms